alginate
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Alginates are from brown seaweeds, which are linear copolymers of MnA, β-1,4-D-mannuronic acid, and GlcA, α-1,4-L-guluronic acid. It exists as polyMnA, polyGlcA, or polyMnA−GlcA blocks.
References
Li, Jin, et al. "Insights into Algal Polysaccharides: A Review of Their Structure, Depolymerases, and Metabolic Pathways." Journal of Agricultural and Food Chemistry 70.6 (2022): 1749-1765. Click here to redirect detail information.
CAZyme Gene Cluster:
| Substrate | Genome_ID | CGC_ID | CGC_Content | PUL_ID | Species Name |
|---|---|---|---|---|---|
| alginate | MGYG000003403 | MGYG000003403_1|CGC2 |
PL6|PL6_1,PL17_2|PL17,2.A.1.14.25
|
PUL0053 | Stenotrophomonas maltophilia |
| alginate | MGYG000004708 | MGYG000004708_20|CGC1 |
PL38,null,2.A.1.14.25,null,PL17|PL17_2,PL6|PL6_1,null,8.A.46.1.5,1.B.14.6.1
|
PUL0055 | |
| alginate | MGYG000001313 | MGYG000001313_17|CGC2 |
2.A.4.7.9,null,null,PL6|PL6_1,null,8.A.46.1.2,1.B.14.6.1,null,PL17|PL17_2,null,2.A.1.14.25
|
PUL0056 | Bacteroides eggerthii |
| alginate | MGYG000003711 | MGYG000003711_3|CGC1 |
PL6|PL6_1,PL17_2|PL17,2.A.1.14.25
|
PUL0053 | Stenotrophomonas maltophilia |
| alginate | MGYG000000437 | MGYG000000437_33|CGC1 |
PL38,null,2.A.1.14.25,null,PL17|PL17_2,PL6_1|PL6
|
PUL0199 | Alistipes sp001941065 |
| alginate | MGYG000002381 | MGYG000002381_61|CGC1 |
2.A.1.14.25,PL17|PL17_2,PL6|PL6_1,1.B.14.12.1,GntR,null,1.B.71.1.4,2.A.1.36.3
|
PUL0053 | Stenotrophomonas bentonitica |