dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02118
Location and strand information: 52765 - 54447 (-)
Family: PL1|PL1_2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.2094
Protein molecular weight: 61462.49
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02119
Location and strand information: 54506 - 58900 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02120
Location and strand information: 59029 - 61668 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 7.2034
Protein molecular weight: 99712.83
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02121
Location and strand information: 61721 - 64072 (-)
Family: GH139
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.1477
Protein molecular weight: 90538.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02122
Location and strand information: 64125 - 65558 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02123
Location and strand information: 65590 - 68868 (-)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.5529
Protein molecular weight: 123862.7
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02124
Location and strand information: 69159 - 70682 (-)
Family: null
Protein type: null
Protein description: Thiol-disulfide oxidoreductase ResA

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02125
Location and strand information: 70855 - 73704 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.7581
Protein molecular weight: 107748.33
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02126
Location and strand information: 73740 - 77135 (-)
Family: CBM67|GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 7.0024
Protein molecular weight: 129264.46
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02127
Location and strand information: 77139 - 78710 (+)
Family: null
Protein type: null
Protein description: Thiol-disulfide oxidoreductase ResA

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02128
Location and strand information: 78773 - 82984 (-)
Family: GH137|GH2|CBM57
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.9766
Protein molecular weight: 161134.86
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02129
Location and strand information: 83187 - 85886 (-)
Family: GH138
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.4998
Protein molecular weight: 102459.68
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02130
Location and strand information: 86103 - 86237 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02131
Location and strand information: 86463 - 86807 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02132
Location and strand information: 86973 - 89177 (-)
Family: GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.8739
Protein molecular weight: 84547.06
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02133
Location and strand information: 89340 - 91229 (-)
Family: GH141
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6185
Protein molecular weight: 71909.12
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02134
Location and strand information: 91278 - 93380 (-)
Family: GH127
Protein type: CAZyme
Protein description: Non-reducing end beta-L-arabinofuranosidase
Protein isoelectric point: 6.8383
Protein molecular weight: 78668.72
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02135
Location and strand information: 93596 - 94123 (-)
Family: null
Protein type: null
Protein description: Methylated-DNA--protein-cysteine methyltransferase

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02136
Location and strand information: 94353 - 94562 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02137
Location and strand information: 94639 - 97113 (+)
Family: GH95|CBM13|CBM2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.8768
Protein molecular weight: 93086.04
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02138
Location and strand information: 97126 - 98328 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 6.3659
Protein molecular weight: 45725.99
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02139
Location and strand information: 98370 - 99842 (+)
Family: GH140
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.878
Protein molecular weight: 56905.44
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02140
Location and strand information: 99839 - 103708 (+)
Family: CBM67|GH33|GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.7274
Protein molecular weight: 145930.21
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02141
Location and strand information: 103887 - 104774 (+)
Family: null
Protein type: null
Protein description: Dihydroanticapsin 7-dehydrogenase

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02142
Location and strand information: 104818 - 105621 (-)
Family: null
Protein type: null
Protein description: putative NTE family protein

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02143
Location and strand information: 105824 - 107788 (-)
Family: CE19|CE0
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.9779
Protein molecular weight: 73839.54
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02144
Location and strand information: 107795 - 109135 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.0748
Protein molecular weight: 49403.82
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02145
Location and strand information: 109336 - 112170 (-)
Family: CBM67|GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.8617
Protein molecular weight: 106748.74
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02146
Location and strand information: 112365 - 115688 (-)
Family: GH143|GH142
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.2533
Protein molecular weight: 127248.19
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02147
Location and strand information: 115715 - 116647 (-)
Family: GH43|GH43_18
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.998
Protein molecular weight: 35542.36
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02148
Location and strand information: 116660 - 116812 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02149
Location and strand information: 116834 - 117502 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02150
Location and strand information: 117565 - 119304 (-)
Family: PL1|PL1_2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3023
Protein molecular weight: 64911.98
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02151
Location and strand information: 119637 - 121850 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02152
Location and strand information: 121863 - 125243 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02153
Location and strand information: 125266 - 126750 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02154
Location and strand information: 126912 - 127802 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02155
Location and strand information: 128011 - 130275 (-)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1682
Protein molecular weight: 86404.71
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_10|CGC2
Gene ID: MGYG000000029_02156
Location and strand information: 130283 - 131251 (-)
Family: GH130
Protein type: CAZyme
Protein description: 1,4-beta-mannosyl-N-acetylglucosamine phosphorylase
Protein isoelectric point: 5.6011
Protein molecular weight: 36769.78
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000029_02118	PL1_e27
MGYG000000029_02120	GH2_e53
MGYG000000029_02121	GH139_e0\|3.2.1.-	pectin
MGYG000000029_02123	GH106_e13\|3.2.1.40	pectin
MGYG000000029_02125	GH2_e77\|3.2.1.-	pectin
MGYG000000029_02126	GH2_e4\|CBM67_e8\|3.2.1.23	beta-galactan
MGYG000000029_02128	GH2_e49\|GH137_e0\|CBM57_e1\|3.2.1.31\|3.2.1.185	pectin\|beta-glucuronan
MGYG000000029_02129	GH138_e0\|3.2.1.-
MGYG000000029_02132	GH78_e26\|3.2.1.40	alpha-rhamnoside
MGYG000000029_02133	GH141_e0\|3.2.1.51	pectin
MGYG000000029_02134	GH127_e2\|3.2.1.-	carrageenan
MGYG000000029_02137	GH95_e0\|CBM2_e92\|CBM13_e181\|3.2.1.-	xylan\|pectin
MGYG000000029_02138	GH105_e23\|3.2.1.-	pectin
MGYG000000029_02139	GH140_e1\|3.2.1.-	pectin
MGYG000000029_02140	GH78_e32\|GH33_e8\|CBM67_e6\|3.2.1.40\|3.2.1.-	pectin\|alpha-rhamnoside
MGYG000000029_02143	CE0_e11
MGYG000000029_02144	GH28_e11
MGYG000000029_02145	GH78_e41\|3.2.1.40	alpha-rhamnoside
MGYG000000029_02146	GH143_e0\|GH142_e0
MGYG000000029_02147	GH43_e130\|3.2.1.55	xylan
MGYG000000029_02150	PL1_e27
MGYG000000029_02155	GH92_e22\|3.2.1.24	hostglycan
MGYG000000029_02156	GH130_e1\|2.4.1.320\|2.4.1.319\|2.4.1.-	beta-mannan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000029_02118	hypothetical protein	CAZyme	52765	54447	-	PL1\| PL1_2
MGYG000000029_02119	Sensor histidine kinase RcsC	TF	54506	58900	-	HTH_AraC
MGYG000000029_02120	Beta-galactosidase	CAZyme	59029	61668	-	GH2
MGYG000000029_02121	hypothetical protein	CAZyme	61721	64072	-	GH139
MGYG000000029_02122	hypothetical protein	null	64125	65558	-	SASA
MGYG000000029_02123	hypothetical protein	CAZyme	65590	68868	-	GH106
MGYG000000029_02124	Thiol-disulfide oxidoreductase ResA	null	69159	70682	-	Redoxin
MGYG000000029_02125	Beta-galactosidase	CAZyme	70855	73704	-	GH2
MGYG000000029_02126	Beta-galactosidase	CAZyme	73740	77135	-	CBM67\| GH2
MGYG000000029_02127	Thiol-disulfide oxidoreductase ResA	null	77139	78710	+	AhpC-TSA
MGYG000000029_02128	Beta-galactosidase	CAZyme	78773	82984	-	GH137\| GH2\| CBM57
MGYG000000029_02129	hypothetical protein	CAZyme	83187	85886	-	GH138
MGYG000000029_02130	hypothetical protein	null	86103	86237	+	No domain
MGYG000000029_02131	hypothetical protein	null	86463	86807	-	No domain
MGYG000000029_02132	hypothetical protein	CAZyme	86973	89177	-	GH78
MGYG000000029_02133	hypothetical protein	CAZyme	89340	91229	-	GH141
MGYG000000029_02134	Non-reducing end beta-L-arabinofuranosidase	CAZyme	91278	93380	-	GH127
MGYG000000029_02135	Methylated-DNA--protein-cysteine methyltransferase	null	93596	94123	-	DNA_binding_1
MGYG000000029_02136	hypothetical protein	null	94353	94562	+	No domain
MGYG000000029_02137	hypothetical protein	CAZyme	94639	97113	+	GH95\| CBM13\| CBM2
MGYG000000029_02138	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	97126	98328	+	GH105
MGYG000000029_02139	hypothetical protein	CAZyme	98370	99842	+	GH140
MGYG000000029_02140	hypothetical protein	CAZyme	99839	103708	+	CBM67\| GH33\| GH78
MGYG000000029_02141	Dihydroanticapsin 7-dehydrogenase	null	103887	104774	+	adh_short_C2
MGYG000000029_02142	putative NTE family protein	null	104818	105621	-	Patatin
MGYG000000029_02143	hypothetical protein	CAZyme	105824	107788	-	CE19\| CE0
MGYG000000029_02144	hypothetical protein	CAZyme	107795	109135	-	GH28
MGYG000000029_02145	hypothetical protein	CAZyme	109336	112170	-	CBM67\| GH78
MGYG000000029_02146	hypothetical protein	CAZyme	112365	115688	-	GH143\| GH142
MGYG000000029_02147	hypothetical protein	CAZyme	115715	116647	-	GH43\| GH43_18
MGYG000000029_02148	hypothetical protein	null	116660	116812	-	No domain
MGYG000000029_02149	hypothetical protein	null	116834	117502	-	DUF3826
MGYG000000029_02150	hypothetical protein	CAZyme	117565	119304	-	PL1\| PL1_2
MGYG000000029_02151	hypothetical protein	null	119637	121850	-	SusD-like_3\| SusD_RagB
MGYG000000029_02152	hypothetical protein	TC	121863	125243	-	1.B.14.6.1
MGYG000000029_02153	hypothetical protein	null	125266	126750	-	DUF4992\| DUF4957
MGYG000000029_02154	hypothetical protein	null	126912	127802	-	AP_endonuc_2
MGYG000000029_02155	hypothetical protein	CAZyme	128011	130275	-	GH92
MGYG000000029_02156	1,4-beta-mannosyl-N-acetylglucosamine phosphorylase	CAZyme	130283	131251	-	GH130
Protein ID	Protein Name	Type	Start	End	Strand	Signature