dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000078_1|CGC4
Gene ID: MGYG000000078_00289
Location and strand information: 340031 - 341869 (-)
Family: 3.A.1.106.2
Protein type: TC
Protein description: Putative multidrug export ATP-binding/permease protein

Gene clsuter ID: MGYG000000078_1|CGC4
Gene ID: MGYG000000078_00290
Location and strand information: 341974 - 343530 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.827
Protein molecular weight: 57681.43
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000078_1|CGC4
Gene ID: MGYG000000078_00291
Location and strand information: 343521 - 344564 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000078_1|CGC4
Gene ID: MGYG000000078_00292
Location and strand information: 344512 - 346464 (-)
Family: GH43|GH43_12
Protein type: CAZyme
Protein description: Xylan 1,3-beta-xylosidase
Protein isoelectric point: 5.0737
Protein molecular weight: 74784.37
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000078_1|CGC4
Gene ID: MGYG000000078_00293
Location and strand information: 346675 - 347538 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000078_1|CGC4
Gene ID: MGYG000000078_00294
Location and strand information: 347550 - 349046 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000078_1|CGC4
Gene ID: MGYG000000078_00295
Location and strand information: 349180 - 350748 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000078_1|CGC4
Gene ID: MGYG000000078_00296
Location and strand information: 351171 - 351812 (-)
Family: null
Protein type: null
Protein description: IMPACT family member YigZ

Gene clsuter ID: MGYG000000078_1|CGC4
Gene ID: MGYG000000078_00297
Location and strand information: 351966 - 354719 (+)
Family: GT51
Protein type: CAZyme
Protein description: Penicillin-binding protein 1A
Protein isoelectric point: 4.8256
Protein molecular weight: 99993.21
NCBI Blastp with this gene.
Protein sequence: copy AA seq

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is xylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000078_00289	Putative multidrug export ATP-binding/permease protein	TC	340031	341869	-	3.A.1.106.2
MGYG000000078_00290	hypothetical protein	CAZyme	341974	343530	-	GH28
MGYG000000078_00291	hypothetical protein	null	343521	344564	-	No domain
MGYG000000078_00292	Xylan 1,3-beta-xylosidase	CAZyme	344512	346464	-	GH43\| GH43_12
MGYG000000078_00293	L-arabinose transport system permease protein AraQ	TC	346675	347538	-	3.A.1.1.29
MGYG000000078_00294	hypothetical protein	TC	347550	349046	-	3.A.1.1.29
MGYG000000078_00295	hypothetical protein	STP	349180	350748	-	SBP_bac_1
MGYG000000078_00296	IMPACT family member YigZ	null	351171	351812	-	UPF0029\| DUF1949
MGYG000000078_00297	Penicillin-binding protein 1A	CAZyme	351966	354719	+	GT51
Protein ID	Protein Name	Type	Start	End	Strand	Signature