dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000104_5|CGC3
Gene ID: MGYG000000104_01038
Location and strand information: 113128 - 115563 (-)
Family: GH0|GH38
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.6011
Protein molecular weight: 95326.19
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000104_5|CGC3
Gene ID: MGYG000000104_01039
Location and strand information: 115950 - 116867 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000000104_5|CGC3
Gene ID: MGYG000000104_01040
Location and strand information: 117028 - 118884 (-)
Family: GH20
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.9094
Protein molecular weight: 72603.08
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000104_5|CGC3
Gene ID: MGYG000000104_01041
Location and strand information: 118957 - 122628 (-)
Family: CBM32|GH85
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.2113
Protein molecular weight: 136406.92
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000104_5|CGC3
Gene ID: MGYG000000104_01042
Location and strand information: 122776 - 125148 (-)
Family: GH3
Protein type: CAZyme
Protein description: Thermostable beta-glucosidase B
Protein isoelectric point: 4.5444
Protein molecular weight: 87433.9
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000104_5|CGC3
Gene ID: MGYG000000104_01043
Location and strand information: 125351 - 126796 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000104_5|CGC3
Gene ID: MGYG000000104_01044
Location and strand information: 127022 - 132424 (-)
Family: GH85
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.0675
Protein molecular weight: 200542.89
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000104_5|CGC3
Gene ID: MGYG000000104_01045
Location and strand information: 132651 - 133394 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: putative response regulatory protein

Gene clsuter ID: MGYG000000104_5|CGC3
Gene ID: MGYG000000104_01046
Location and strand information: 133426 - 136560 (-)
Family: GH38
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0424
Protein molecular weight: 120998.04
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000104_5|CGC3
Gene ID: MGYG000000104_01047
Location and strand information: 136738 - 137748 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000104_5|CGC3
Gene ID: MGYG000000104_01048
Location and strand information: 137768 - 138727 (-)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000000104_5|CGC3
Gene ID: MGYG000000104_01049
Location and strand information: 138924 - 140438 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Regulator of RpoS

Gene clsuter ID: MGYG000000104_5|CGC3
Gene ID: MGYG000000104_01050
Location and strand information: 140431 - 142170 (-)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000104_5|CGC3
Gene ID: MGYG000000104_01051
Location and strand information: 142381 - 143040 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000104_5|CGC3
Gene ID: MGYG000000104_01052
Location and strand information: 143208 - 144119 (-)
Family: null
Protein type: null
Protein description: Beta-glucoside kinase

Gene clsuter ID: MGYG000000104_5|CGC3
Gene ID: MGYG000000104_01053
Location and strand information: 144204 - 147350 (-)
Family: GH38
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.4297
Protein molecular weight: 121749.1
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000104_5|CGC3
Gene ID: MGYG000000104_01054
Location and strand information: 147547 - 149625 (-)
Family: GH42
Protein type: CAZyme
Protein description: Beta-galactosidase BglY
Protein isoelectric point: 5.3591
Protein molecular weight: 80354.74
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000104_5|CGC3
Gene ID: MGYG000000104_01055
Location and strand information: 149892 - 151433 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000104_5|CGC3
Gene ID: MGYG000000104_01056
Location and strand information: 151505 - 152401 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000104_5|CGC3
Gene ID: MGYG000000104_01057
Location and strand information: 152412 - 153407 (-)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000000104_5|CGC3
Gene ID: MGYG000000104_01058
Location and strand information: 153640 - 155178 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Chemotaxis response regulator protein-glutamate methylesterase

Gene clsuter ID: MGYG000000104_5|CGC3
Gene ID: MGYG000000104_01059
Location and strand information: 155178 - 156977 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000104_01038	GH0_e226
MGYG000000104_01040	GH20_e10
MGYG000000104_01041	GH85_e11\|CBM32_e34\|3.2.1.18
MGYG000000104_01042	GH3_e39\|3.2.1.21	beta-glucan
MGYG000000104_01044	GH85_e1
MGYG000000104_01046	GH38_e14\|3.2.1.24	hostglycan
MGYG000000104_01053	GH38_e14\|3.2.1.24	hostglycan
MGYG000000104_01054	GH42_e16\|3.2.1.23	arabinogalactan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is host glycan

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000104_01038	hypothetical protein	CAZyme	113128	115563	-	GH0\| GH38
MGYG000000104_01039	HTH-type transcriptional activator RhaS	TF	115950	116867	+	HTH_AraC+HTH_AraC
MGYG000000104_01040	hypothetical protein	CAZyme	117028	118884	-	GH20
MGYG000000104_01041	hypothetical protein	CAZyme	118957	122628	-	CBM32\| GH85
MGYG000000104_01042	Thermostable beta-glucosidase B	CAZyme	122776	125148	-	GH3
MGYG000000104_01043	hypothetical protein	STP	125351	126796	-	SBP_bac_1
MGYG000000104_01044	hypothetical protein	CAZyme	127022	132424	-	GH85
MGYG000000104_01045	putative response regulatory protein	TF	132651	133394	-	HTH_AraC+HTH_AraC
MGYG000000104_01046	hypothetical protein	CAZyme	133426	136560	-	GH38
MGYG000000104_01047	hypothetical protein	TC	136738	137748	-	3.A.1.1.29
MGYG000000104_01048	putative multiple-sugar transport system permease YteP	TC	137768	138727	-	3.A.1.1.10
MGYG000000104_01049	Regulator of RpoS	TF	138924	140438	-	HTH_AraC+HTH_AraC
MGYG000000104_01050	hypothetical protein	TC	140431	142170	-	8.A.59.2.1
MGYG000000104_01051	hypothetical protein	null	142381	143040	+	DUF624
MGYG000000104_01052	Beta-glucoside kinase	null	143208	144119	-	ROK
MGYG000000104_01053	hypothetical protein	CAZyme	144204	147350	-	GH38
MGYG000000104_01054	Beta-galactosidase BglY	CAZyme	147547	149625	-	GH42
MGYG000000104_01055	hypothetical protein	STP	149892	151433	-	SBP_bac_1
MGYG000000104_01056	L-arabinose transport system permease protein AraQ	TC	151505	152401	-	3.A.1.1.29
MGYG000000104_01057	putative multiple-sugar transport system permease YteP	TC	152412	153407	-	3.A.1.1.10
MGYG000000104_01058	Chemotaxis response regulator protein-glutamate methylesterase	TF	153640	155178	+	HTH_AraC
MGYG000000104_01059	hypothetical protein	TC	155178	156977	+	8.A.59.2.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature