dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000138_18|CGC1
Gene ID: MGYG000000138_03900
Location and strand information: 47185 - 48630 (+)
Family: CE3|CE0
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.5298
Protein molecular weight: 54335.46
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000138_18|CGC1
Gene ID: MGYG000000138_03901
Location and strand information: 49337 - 50452 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 6.4925
Protein molecular weight: 42841.42
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000138_18|CGC1
Gene ID: MGYG000000138_03902
Location and strand information: 50988 - 51194 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000138_18|CGC1
Gene ID: MGYG000000138_03903
Location and strand information: 51242 - 52147 (+)
Family: FecR
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000138_18|CGC1
Gene ID: MGYG000000138_03904
Location and strand information: 52340 - 55705 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000138_18|CGC1
Gene ID: MGYG000000138_03905
Location and strand information: 55727 - 57520 (+)
Family: 8.A.46.1.6
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000138_18|CGC1
Gene ID: MGYG000000138_03906
Location and strand information: 57616 - 60453 (+)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3654
Protein molecular weight: 108304.09
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000138_18|CGC1
Gene ID: MGYG000000138_03907
Location and strand information: 60450 - 61679 (-)
Family: 2.A.1.21.10
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000138_18|CGC1
Gene ID: MGYG000000138_03908
Location and strand information: 61792 - 62970 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000138_18|CGC1
Gene ID: MGYG000000138_03909
Location and strand information: 63170 - 65560 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000138_18|CGC1
Gene ID: MGYG000000138_03910
Location and strand information: 65743 - 66423 (+)
Family: 3.A.1.122.14
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein YknY

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000138_03900	hypothetical protein	CAZyme	47185	48630	+	CE3\| CE0
MGYG000000138_03901	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	49337	50452	+	GH105
MGYG000000138_03902	hypothetical protein	null	50988	51194	+	No domain
MGYG000000138_03903	hypothetical protein	STP	51242	52147	+	FecR
MGYG000000138_03904	hypothetical protein	TC	52340	55705	+	1.B.14.6.1
MGYG000000138_03905	hypothetical protein	TC	55727	57520	+	8.A.46.1.6
MGYG000000138_03906	hypothetical protein	CAZyme	57616	60453	+	GH106
MGYG000000138_03907	hypothetical protein	TC	60450	61679	-	2.A.1.21.10
MGYG000000138_03908	hypothetical protein	null	61792	62970	+	DUF5128
MGYG000000138_03909	hypothetical protein	null	63170	65560	+	MacB_PCD\| FtsX\| FtsX
MGYG000000138_03910	putative ABC transporter ATP-binding protein YknY	TC	65743	66423	+	3.A.1.122.14
Protein ID	Protein Name	Type	Start	End	Strand	Signature