dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000198_3|CGC5
Gene ID: MGYG000000198_02492
Location and strand information: 600596 - 602194 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.4466
Protein molecular weight: 59978.28
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000198_3|CGC5
Gene ID: MGYG000000198_02493
Location and strand information: 602373 - 603224 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000198_3|CGC5
Gene ID: MGYG000000198_02494
Location and strand information: 603231 - 604124 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: sn-glycerol-3-phosphate transport system permease protein UgpA

Gene clsuter ID: MGYG000000198_3|CGC5
Gene ID: MGYG000000198_02495
Location and strand information: 604205 - 605554 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Putative ABC transporter substrate-binding protein YesO

Gene clsuter ID: MGYG000000198_3|CGC5
Gene ID: MGYG000000198_02496
Location and strand information: 605986 - 607113 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 4.7911
Protein molecular weight: 44163.32
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000198_3|CGC5
Gene ID: MGYG000000198_02497
Location and strand information: 607202 - 608605 (-)
Family: 9.B.18.1.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000198_3|CGC5
Gene ID: MGYG000000198_02498
Location and strand information: 608648 - 610387 (-)
Family: Response_reg+GGDEF+EAL
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000198_3|CGC5
Gene ID: MGYG000000198_02499
Location and strand information: 610410 - 611408 (-)
Family: null
Protein type: null
Protein description: Antilisterial bacteriocin subtilosin biosynthesis protein AlbA

Gene clsuter ID: MGYG000000198_3|CGC5
Gene ID: MGYG000000198_02500
Location and strand information: 611465 - 612676 (-)
Family: GT4
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.4442
Protein molecular weight: 46152.13
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000198_02492	hypothetical protein	CAZyme	600596	602194	-	GH28
MGYG000000198_02493	L-arabinose transport system permease protein AraQ	TC	602373	603224	-	3.A.1.1.11
MGYG000000198_02494	sn-glycerol-3-phosphate transport system permease protein UgpA	TC	603231	604124	-	3.A.1.1.11
MGYG000000198_02495	Putative ABC transporter substrate-binding protein YesO	TC	604205	605554	-	3.A.1.1.11
MGYG000000198_02496	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	605986	607113	+	GH105
MGYG000000198_02497	hypothetical protein	TC	607202	608605	-	9.B.18.1.2
MGYG000000198_02498	hypothetical protein	STP	608648	610387	-	Response_reg\| GGDEF\| EAL
MGYG000000198_02499	Antilisterial bacteriocin subtilosin biosynthesis protein AlbA	null	610410	611408	-	Radical_SAM\| SPASM
MGYG000000198_02500	hypothetical protein	CAZyme	611465	612676	-	GT4
Protein ID	Protein Name	Type	Start	End	Strand	Signature