dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000246_4|CGC4
Gene ID: MGYG000000246_01604
Location and strand information: 97989 - 99389 (+)
Family: 4.A.5.1.6
Protein type: TC
Protein description: PTS system galactitol-specific EIIC component

Gene clsuter ID: MGYG000000246_4|CGC4
Gene ID: MGYG000000246_01605
Location and strand information: 99499 - 100395 (+)
Family: null
Protein type: null
Protein description: Protein LacX, plasmid

Gene clsuter ID: MGYG000000246_4|CGC4
Gene ID: MGYG000000246_01606
Location and strand information: 100591 - 101427 (+)
Family: null
Protein type: null
Protein description: Cryptic beta-glucoside bgl operon antiterminator

Gene clsuter ID: MGYG000000246_4|CGC4
Gene ID: MGYG000000246_01607
Location and strand information: 101438 - 102838 (+)
Family: GH1
Protein type: CAZyme
Protein description: 6-phospho-beta-galactosidase
Protein isoelectric point: 5.1237
Protein molecular weight: 53749.31
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000246_4|CGC4
Gene ID: MGYG000000246_01608
Location and strand information: 102851 - 103162 (+)
Family: 4.A.3.1.2
Protein type: TC
Protein description: PTS system lactose-specific EIIA component

Gene clsuter ID: MGYG000000246_4|CGC4
Gene ID: MGYG000000246_01609
Location and strand information: 103404 - 105083 (+)
Family: 4.A.3.1.1
Protein type: TC
Protein description: PTS system lactose-specific EIICB component

Gene clsuter ID: MGYG000000246_4|CGC4
Gene ID: MGYG000000246_01610
Location and strand information: 105114 - 106136 (+)
Family: CBM32|GH53|CBM61
Protein type: CAZyme
Protein description: Arabinogalactan endo-beta-1,4-galactanase
Protein isoelectric point: 4.6252
Protein molecular weight: 38081.67
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000246_4|CGC4
Gene ID: MGYG000000246_01611
Location and strand information: 106173 - 106724 (+)
Family: GH53|CBM61
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.279
Protein molecular weight: 20595.66
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000246_4|CGC4
Gene ID: MGYG000000246_01612
Location and strand information: 106820 - 107653 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Arabinose operon regulatory protein

Gene clsuter ID: MGYG000000246_4|CGC4
Gene ID: MGYG000000246_01613
Location and strand information: 107764 - 109926 (+)
Family: GH36
Protein type: CAZyme
Protein description: Alpha-galactosidase AgaA
Protein isoelectric point: 5.3049
Protein molecular weight: 80717.24
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000246_4|CGC4
Gene ID: MGYG000000246_01614
Location and strand information: 109938 - 111209 (+)
Family: 3.A.1.1.28
Protein type: TC
Protein description: Multiple sugar-binding protein

Gene clsuter ID: MGYG000000246_4|CGC4
Gene ID: MGYG000000246_01615
Location and strand information: 111222 - 112088 (+)
Family: 3.A.1.1.28
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000000246_4|CGC4
Gene ID: MGYG000000246_01616
Location and strand information: 112098 - 112931 (+)
Family: 3.A.1.1.28
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000246_4|CGC4
Gene ID: MGYG000000246_01617
Location and strand information: 113044 - 114489 (+)
Family: GH13_18|GH13
Protein type: CAZyme
Protein description: Sucrose phosphorylase
Protein isoelectric point: 4.623
Protein molecular weight: 55310.3
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000246_4|CGC4
Gene ID: MGYG000000246_01618
Location and strand information: 114607 - 116229 (+)
Family: GH13_31|GH13
Protein type: CAZyme
Protein description: Glucan 1,6-alpha-glucosidase
Protein isoelectric point: 4.4838
Protein molecular weight: 62246
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000246_01607	GH1_e2\|3.2.1.85	beta-galactan
MGYG000000246_01610	GH53_e1\|CBM61_e2\|CBM32_e53\|3.2.1.89	arabinogalactan
MGYG000000246_01611
MGYG000000246_01613	GH36_e25\|3.2.1.22	alpha-galactan
MGYG000000246_01617	GH13_e107\|2.4.1.7\|2.4.1.-	sucrose
MGYG000000246_01618	GH13_e0\|5.4.99.11\|3.2.1.70\|3.2.1.20\|3.2.1.10\|3.2.1.-\|2.4.1.-	sucrose\|starch

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is sucrose

Substrate predicted by dbCAN-PUL is raffinose download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000246_01604	PTS system galactitol-specific EIIC component	TC	97989	99389	+	4.A.5.1.6
MGYG000000246_01605	Protein LacX, plasmid	null	99499	100395	+	Aldose_epim
MGYG000000246_01606	Cryptic beta-glucoside bgl operon antiterminator	null	100591	101427	+	CAT_RBD\| PRD\| PRD
MGYG000000246_01607	6-phospho-beta-galactosidase	CAZyme	101438	102838	+	GH1
MGYG000000246_01608	PTS system lactose-specific EIIA component	TC	102851	103162	+	4.A.3.1.2
MGYG000000246_01609	PTS system lactose-specific EIICB component	TC	103404	105083	+	4.A.3.1.1
MGYG000000246_01610	Arabinogalactan endo-beta-1,4-galactanase	CAZyme	105114	106136	+	CBM32\| GH53\| CBM61
MGYG000000246_01611	hypothetical protein	CAZyme	106173	106724	+	GH53\| CBM61
MGYG000000246_01612	Arabinose operon regulatory protein	TF	106820	107653	-	HTH_AraC+HTH_AraC
MGYG000000246_01613	Alpha-galactosidase AgaA	CAZyme	107764	109926	+	GH36
MGYG000000246_01614	Multiple sugar-binding protein	TC	109938	111209	+	3.A.1.1.28
MGYG000000246_01615	Lactose transport system permease protein LacF	TC	111222	112088	+	3.A.1.1.28
MGYG000000246_01616	L-arabinose transport system permease protein AraQ	TC	112098	112931	+	3.A.1.1.28
MGYG000000246_01617	Sucrose phosphorylase	CAZyme	113044	114489	+	GH13_18\| GH13
MGYG000000246_01618	Glucan 1,6-alpha-glucosidase	CAZyme	114607	116229	+	GH13_31\| GH13
Protein ID	Protein Name	Type	Start	End	Strand	Signature