dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000287_2|CGC1
Gene ID: MGYG000000287_00259
Location and strand information: 33070 - 33957 (+)
Family: 3.A.1.1.20
Protein type: TC
Protein description: sn-glycerol-3-phosphate transport system permease protein UgpA

Gene clsuter ID: MGYG000000287_2|CGC1
Gene ID: MGYG000000287_00260
Location and strand information: 33968 - 34798 (+)
Family: 3.A.1.1.18
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000287_2|CGC1
Gene ID: MGYG000000287_00261
Location and strand information: 34832 - 37429 (+)
Family: GH116
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.2219
Protein molecular weight: 99276.03
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000287_2|CGC1
Gene ID: MGYG000000287_00262
Location and strand information: 37500 - 38753 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000000287_2|CGC1
Gene ID: MGYG000000287_00263
Location and strand information: 38746 - 40545 (-)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000287_00259	sn-glycerol-3-phosphate transport system permease protein UgpA	TC	33070	33957	+	3.A.1.1.20
MGYG000000287_00260	L-arabinose transport system permease protein AraQ	TC	33968	34798	+	3.A.1.1.18
MGYG000000287_00261	hypothetical protein	CAZyme	34832	37429	+	GH116
MGYG000000287_00262	HTH-type transcriptional activator RhaR	TF	37500	38753	-	HTH_AraC+HTH_AraC
MGYG000000287_00263	hypothetical protein	TC	38746	40545	-	8.A.59.2.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature