dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000325_7|CGC1
Gene ID: MGYG000000325_00992
Location and strand information: 7130 - 8221 (-)
Family: 3.A.1.2.25
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000325_7|CGC1
Gene ID: MGYG000000325_00993
Location and strand information: 8234 - 9925 (-)
Family: MCPsignal
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000325_7|CGC1
Gene ID: MGYG000000325_00994
Location and strand information: 10109 - 11134 (-)
Family: 3.A.1.2.14
Protein type: TC
Protein description: Inner membrane ABC transporter permease protein YjfF

Gene clsuter ID: MGYG000000325_7|CGC1
Gene ID: MGYG000000325_00995
Location and strand information: 11136 - 12197 (-)
Family: 3.A.1.2.14
Protein type: TC
Protein description: Fructose import permease protein FruF

Gene clsuter ID: MGYG000000325_7|CGC1
Gene ID: MGYG000000325_00996
Location and strand information: 12194 - 13711 (-)
Family: 3.A.1.2.23
Protein type: TC
Protein description: Fructose import ATP-binding protein FruK

Gene clsuter ID: MGYG000000325_7|CGC1
Gene ID: MGYG000000325_00997
Location and strand information: 13904 - 14953 (-)
Family: 3.A.1.2.1
Protein type: TC
Protein description: Fructose import binding protein FruE

Gene clsuter ID: MGYG000000325_7|CGC1
Gene ID: MGYG000000325_00998
Location and strand information: 15104 - 16600 (-)
Family: 9.B.33.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000325_7|CGC1
Gene ID: MGYG000000325_00999
Location and strand information: 16597 - 17706 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000000325_7|CGC1
Gene ID: MGYG000000325_01000
Location and strand information: 17703 - 18542 (-)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000000325_7|CGC1
Gene ID: MGYG000000325_01001
Location and strand information: 18682 - 20181 (+)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 5.0945
Protein molecular weight: 56427.75
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000325_7|CGC1
Gene ID: MGYG000000325_01002
Location and strand information: 20225 - 21322 (-)
Family: GntR
Protein type: TF
Protein description: Arabinose metabolism transcriptional repressor

Gene clsuter ID: MGYG000000325_7|CGC1
Gene ID: MGYG000000325_01003
Location and strand information: 21395 - 21571 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000325_7|CGC1
Gene ID: MGYG000000325_01004
Location and strand information: 21798 - 23672 (-)
Family: 3.A.1.111.2
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Gene clsuter ID: MGYG000000325_7|CGC1
Gene ID: MGYG000000325_01005
Location and strand information: 23669 - 25537 (-)
Family: 3.A.1.111.2
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Gene clsuter ID: MGYG000000325_7|CGC1
Gene ID: MGYG000000325_01006
Location and strand information: 25755 - 26477 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000325_7|CGC1
Gene ID: MGYG000000325_01007
Location and strand information: 26542 - 27267 (-)
Family: LytTR
Protein type: TF
Protein description: Transcriptional regulatory protein BtsR

Gene clsuter ID: MGYG000000325_7|CGC1
Gene ID: MGYG000000325_01008
Location and strand information: 27510 - 28850 (+)
Family: 2.A.38.4.1
Protein type: TC
Protein description: Potassium/sodium uptake protein NtpJ

Gene clsuter ID: MGYG000000325_7|CGC1
Gene ID: MGYG000000325_01009
Location and strand information: 28870 - 29517 (+)
Family: 2.A.38.4.4
Protein type: TC
Protein description: Ktr system potassium uptake protein A

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000325_00992	hypothetical protein	TC	7130	8221	-	3.A.1.2.25
MGYG000000325_00993	hypothetical protein	STP	8234	9925	-	MCPsignal
MGYG000000325_00994	Inner membrane ABC transporter permease protein YjfF	TC	10109	11134	-	3.A.1.2.14
MGYG000000325_00995	Fructose import permease protein FruF	TC	11136	12197	-	3.A.1.2.14
MGYG000000325_00996	Fructose import ATP-binding protein FruK	TC	12194	13711	-	3.A.1.2.23
MGYG000000325_00997	Fructose import binding protein FruE	TC	13904	14953	-	3.A.1.2.1
MGYG000000325_00998	hypothetical protein	TC	15104	16600	-	9.B.33.1.1
MGYG000000325_00999	HTH-type transcriptional activator RhaR	TF	16597	17706	-	HTH_AraC+HTH_AraC
MGYG000000325_01000	HTH-type transcriptional activator RhaR	TF	17703	18542	-	HTH_AraC
MGYG000000325_01001	Intracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	18682	20181	+	GH51
MGYG000000325_01002	Arabinose metabolism transcriptional repressor	TF	20225	21322	-	GntR
MGYG000000325_01003	hypothetical protein	null	21395	21571	-	No domain
MGYG000000325_01004	Vitamin B12 import ATP-binding protein BtuD	TC	21798	23672	-	3.A.1.111.2
MGYG000000325_01005	Vitamin B12 import ATP-binding protein BtuD	TC	23669	25537	-	3.A.1.111.2
MGYG000000325_01006	hypothetical protein	null	25755	26477	-	SPOB_a\| HATPase_c_5
MGYG000000325_01007	Transcriptional regulatory protein BtsR	TF	26542	27267	-	LytTR
MGYG000000325_01008	Potassium/sodium uptake protein NtpJ	TC	27510	28850	+	2.A.38.4.1
MGYG000000325_01009	Ktr system potassium uptake protein A	TC	28870	29517	+	2.A.38.4.4
Protein ID	Protein Name	Type	Start	End	Strand	Signature