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CAZyme Gene Cluster: MGYG000000559_2|CGC1
CGC gene composition diagram |
Gene composition table |
Substrate predicted by eCAMI subfamily |
Substrate predicted by dbCAN-PUL search |
Genomic context
CGC gene composition diagram
Gene composition table
| Protein ID | Protein Name | Type | Start | End | Strand | Signature |
|---|---|---|---|---|---|---|
| MGYG000000559_00241 | Holliday junction ATP-dependent DNA helicase RuvB |
TC | 102336 | 104669 | + | 3.A.24.1.1 |
| MGYG000000559_00242 | 5'-nucleotidase |
null | 104772 | 105425 | + | HAD_2 |
| MGYG000000559_00243 | Multidrug resistance protein MdtA |
TC | 105624 | 106706 | + | 2.A.6.2.28 |
| MGYG000000559_00244 | Efflux pump membrane transporter BepE |
TC | 106725 | 109766 | + | 2.A.6.2.33 |
| MGYG000000559_00245 | hypothetical protein |
null | 109753 | 111096 | + | OEP| OEP |
| MGYG000000559_00246 | hypothetical protein |
CAZyme | 111214 | 113670 | - | GH31 |
| MGYG000000559_00247 | Arabinoxylan arabinofuranohydrolase |
CAZyme | 113787 | 115175 | - | GH43| CBM6| CBM42| GH43_29 |
| MGYG000000559_00248 | Arabinoxylan arabinofuranohydrolase |
CAZyme | 115249 | 116610 | - | GH43| CBM6| CBM42| GH43_29 |
| Protein ID | Protein Name | Type | Start | End | Strand | Signature |
Substrate predicted by eCAMI subfamilies is xylan
| Protein ID | eCAMI subfam | CAZyme substrate |
|---|---|---|
| MGYG000000559_00246 | GH31_e48 | |
| MGYG000000559_00247 | GH43_e137|CBM6_e17|CBM42_e14|3.2.1.8|3.2.1.55|3.2.1.37 | xylan |
| MGYG000000559_00248 | GH43_e137|CBM42_e14|3.2.1.8 | xylan |
Substrate predicted by dbCAN-PUL is arabinoxylan download this fig
