dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000583_10|CGC1
Gene ID: MGYG000000583_00788
Location and strand information: 12322 - 13518 (-)
Family: 2.A.1.15.18
Protein type: TC
Protein description: Protein TsgA

Gene clsuter ID: MGYG000000583_10|CGC1
Gene ID: MGYG000000583_00789
Location and strand information: 13684 - 13902 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000583_10|CGC1
Gene ID: MGYG000000583_00790
Location and strand information: 13955 - 15463 (-)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-L-arabinofuranosidase 2
Protein isoelectric point: 5.0382
Protein molecular weight: 57233.51
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000583_10|CGC1
Gene ID: MGYG000000583_00791
Location and strand information: 15516 - 16826 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7265
Protein molecular weight: 49671.15
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000583_10|CGC1
Gene ID: MGYG000000583_00792
Location and strand information: 16860 - 19010 (-)
Family: GH112
Protein type: CAZyme
Protein description: D-galactosyl-beta-1->4-L-rhamnose phosphorylase
Protein isoelectric point: 5.1259
Protein molecular weight: 81706.15
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000583_10|CGC1
Gene ID: MGYG000000583_00793
Location and strand information: 19105 - 20517 (-)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.3782
Protein molecular weight: 53402.47
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000583_10|CGC1
Gene ID: MGYG000000583_00794
Location and strand information: 20518 - 21570 (-)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YesR
Protein isoelectric point: 4.7655
Protein molecular weight: 39472.1
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000583_10|CGC1
Gene ID: MGYG000000583_00795
Location and strand information: 21766 - 23490 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000583_10|CGC1
Gene ID: MGYG000000583_00796
Location and strand information: 23608 - 24537 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000583_10|CGC1
Gene ID: MGYG000000583_00797
Location and strand information: 24550 - 25503 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000000583_10|CGC1
Gene ID: MGYG000000583_00798
Location and strand information: 25905 - 26903 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000000583_10|CGC1
Gene ID: MGYG000000583_00799
Location and strand information: 26930 - 28264 (-)
Family: 2.A.66.1.33
Protein type: TC
Protein description: Multidrug export protein MepA

Gene clsuter ID: MGYG000000583_10|CGC1
Gene ID: MGYG000000583_00800
Location and strand information: 28487 - 29380 (+)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000000583_10|CGC1
Gene ID: MGYG000000583_00801
Location and strand information: 29830 - 30924 (-)
Family: GGDEF
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000583_10|CGC1
Gene ID: MGYG000000583_00802
Location and strand information: 31308 - 33932 (-)
Family: 8.A.7.1.5
Protein type: TC
Protein description: Pyruvate, phosphate dikinase

Gene clsuter ID: MGYG000000583_10|CGC1
Gene ID: MGYG000000583_00803
Location and strand information: 34305 - 36284 (-)
Family: null
Protein type: null
Protein description: Oleate hydratase

Gene clsuter ID: MGYG000000583_10|CGC1
Gene ID: MGYG000000583_00804
Location and strand information: 36427 - 37005 (-)
Family: HTH_AraC
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000583_10|CGC1
Gene ID: MGYG000000583_00806
Location and strand information: 37548 - 40553 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 4.8159
Protein molecular weight: 114575.05
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000583_10|CGC1
Gene ID: MGYG000000583_00807
Location and strand information: 40758 - 41801 (-)
Family: Aminotran_1_2
Protein type: STP
Protein description: Low specificity L-threonine aldolase

Gene clsuter ID: MGYG000000583_10|CGC1
Gene ID: MGYG000000583_00808
Location and strand information: 41812 - 43266 (-)
Family: null
Protein type: null
Protein description: Cytosol non-specific dipeptidase

Gene clsuter ID: MGYG000000583_10|CGC1
Gene ID: MGYG000000583_00809
Location and strand information: 43375 - 44706 (-)
Family: 2.A.66.1.37
Protein type: TC
Protein description: Multidrug export protein MepA

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000583_00788	Protein TsgA	TC	12322	13518	-	2.A.1.15.18
MGYG000000583_00789	hypothetical protein	null	13684	13902	-	DUF6171
MGYG000000583_00790	Intracellular exo-alpha-L-arabinofuranosidase 2	CAZyme	13955	15463	-	GH51
MGYG000000583_00791	hypothetical protein	CAZyme	15516	16826	-	GH28
MGYG000000583_00792	D-galactosyl-beta-1->4-L-rhamnose phosphorylase	CAZyme	16860	19010	-	GH112
MGYG000000583_00793	hypothetical protein	CAZyme	19105	20517	-	CE12
MGYG000000583_00794	Unsaturated rhamnogalacturonyl hydrolase YesR	CAZyme	20518	21570	-	GH105
MGYG000000583_00795	hypothetical protein	null	21766	23490	-	No domain
MGYG000000583_00796	hypothetical protein	TC	23608	24537	-	3.A.1.1.29
MGYG000000583_00797	putative multiple-sugar transport system permease YteP	TC	24550	25503	-	3.A.1.1.29
MGYG000000583_00798	HTH-type transcriptional activator RhaS	TF	25905	26903	+	HTH_AraC+HTH_AraC
MGYG000000583_00799	Multidrug export protein MepA	TC	26930	28264	-	2.A.66.1.33
MGYG000000583_00800	HTH-type transcriptional activator RhaR	TF	28487	29380	+	HTH_AraC
MGYG000000583_00801	hypothetical protein	STP	29830	30924	-	GGDEF
MGYG000000583_00802	Pyruvate, phosphate dikinase	TC	31308	33932	-	8.A.7.1.5
MGYG000000583_00803	Oleate hydratase	null	34305	36284	-	MCRA
MGYG000000583_00804	hypothetical protein	TF	36427	37005	-	HTH_AraC
MGYG000000583_00806	Beta-galactosidase	CAZyme	37548	40553	-	GH2
MGYG000000583_00807	Low specificity L-threonine aldolase	STP	40758	41801	-	Aminotran_1_2
MGYG000000583_00808	Cytosol non-specific dipeptidase	null	41812	43266	-	Peptidase_M20
MGYG000000583_00809	Multidrug export protein MepA	TC	43375	44706	-	2.A.66.1.37
Protein ID	Protein Name	Type	Start	End	Strand	Signature