dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001306_89|CGC2
Gene ID: MGYG000001306_03855
Location and strand information: 52172 - 53527 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.7472
Protein molecular weight: 51188.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001306_89|CGC2
Gene ID: MGYG000001306_03856
Location and strand information: 53765 - 54895 (+)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4966
Protein molecular weight: 43566.56
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001306_89|CGC2
Gene ID: MGYG000001306_03857
Location and strand information: 55157 - 59440 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001306_89|CGC2
Gene ID: MGYG000001306_03858
Location and strand information: 59637 - 62408 (+)
Family: CE12|GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.5955
Protein molecular weight: 105388.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001306_89|CGC2
Gene ID: MGYG000001306_03859
Location and strand information: 62630 - 65893 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001306_89|CGC2
Gene ID: MGYG000001306_03860
Location and strand information: 65998 - 68106 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001306_89|CGC2
Gene ID: MGYG000001306_03861
Location and strand information: 68286 - 69602 (-)
Family: PL1_2|PL1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.2116
Protein molecular weight: 48516.83
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001306_89|CGC2
Gene ID: MGYG000001306_03862
Location and strand information: 69686 - 71653 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001306_89|CGC2
Gene ID: MGYG000001306_03863
Location and strand information: 71669 - 74911 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001306_89|CGC2
Gene ID: MGYG000001306_03864
Location and strand information: 75261 - 76745 (-)
Family: GH28
Protein type: CAZyme
Protein description: Exo-poly-alpha-D-galacturonosidase
Protein isoelectric point: 6.8012
Protein molecular weight: 55206.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001306_89|CGC2
Gene ID: MGYG000001306_03865
Location and strand information: 76761 - 79289 (-)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.1559
Protein molecular weight: 95930.43
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001306_89|CGC2
Gene ID: MGYG000001306_03866
Location and strand information: 79456 - 81324 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001306_89|CGC2
Gene ID: MGYG000001306_03867
Location and strand information: 81337 - 82836 (-)
Family: PL1_2|PL1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.3873
Protein molecular weight: 54902.31
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001306_89|CGC2
Gene ID: MGYG000001306_03868
Location and strand information: 83113 - 84345 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001306_89|CGC2
Gene ID: MGYG000001306_03869
Location and strand information: 84379 - 84870 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001306_89|CGC2
Gene ID: MGYG000001306_03870
Location and strand information: 85089 - 86522 (-)
Family: 2.A.114.1.4
Protein type: TC
Protein description: hypothetical protein

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001306_03855	GH28_e95\|3.2.1.-	pectin
MGYG000001306_03856	GH105_e14\|3.2.1.172	pectin
MGYG000001306_03858	GH106_e0\|3.2.1.174	pectin
MGYG000001306_03861	PL1_e44\|4.2.2.2	pectin
MGYG000001306_03864	GH28_e61
MGYG000001306_03865	GH105_e12
MGYG000001306_03867	PL1_e7

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001306_03855	hypothetical protein	CAZyme	52172	53527	-	GH28
MGYG000001306_03856	hypothetical protein	CAZyme	53765	54895	+	GH105
MGYG000001306_03857	Sensor histidine kinase RcsC	TF	55157	59440	-	HTH_AraC
MGYG000001306_03858	hypothetical protein	CAZyme	59637	62408	+	CE12\| GH106
MGYG000001306_03859	hypothetical protein	null	62630	65893	-	DUF4450
MGYG000001306_03860	hypothetical protein	null	65998	68106	-	No domain
MGYG000001306_03861	hypothetical protein	CAZyme	68286	69602	-	PL1_2\| PL1
MGYG000001306_03862	hypothetical protein	null	69686	71653	-	SusD-like_3\| SusD_RagB
MGYG000001306_03863	TonB-dependent receptor SusC	TC	71669	74911	-	1.B.14.6.1
MGYG000001306_03864	Exo-poly-alpha-D-galacturonosidase	CAZyme	75261	76745	-	GH28
MGYG000001306_03865	hypothetical protein	CAZyme	76761	79289	-	GH105
MGYG000001306_03866	hypothetical protein	null	79456	81324	-	No domain
MGYG000001306_03867	hypothetical protein	CAZyme	81337	82836	-	PL1_2\| PL1
MGYG000001306_03868	hypothetical protein	null	83113	84345	-	DcaP
MGYG000001306_03869	hypothetical protein	null	84379	84870	-	No domain
MGYG000001306_03870	hypothetical protein	TC	85089	86522	-	2.A.114.1.4
Protein ID	Protein Name	Type	Start	End	Strand	Signature