dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001376_5|CGC6
Gene ID: MGYG000001376_02341
Location and strand information: 344901 - 348149 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001376_5|CGC6
Gene ID: MGYG000001376_02342
Location and strand information: 348172 - 350100 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001376_5|CGC6
Gene ID: MGYG000001376_02343
Location and strand information: 350084 - 351739 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001376_5|CGC6
Gene ID: MGYG000001376_02344
Location and strand information: 351806 - 353443 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.7431
Protein molecular weight: 60394.15
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001376_5|CGC6
Gene ID: MGYG000001376_02345
Location and strand information: 353453 - 354619 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 7.1138
Protein molecular weight: 45331.78
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001376_5|CGC6
Gene ID: MGYG000001376_02346
Location and strand information: 354627 - 356000 (+)
Family: PL1|PL1_2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.6389
Protein molecular weight: 50788.21
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001376_5|CGC6
Gene ID: MGYG000001376_02347
Location and strand information: 356010 - 356969 (+)
Family: CE8
Protein type: CAZyme
Protein description: Pectinesterase A
Protein isoelectric point: 6.6256
Protein molecular weight: 36366.98
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001376_5|CGC6
Gene ID: MGYG000001376_02348
Location and strand information: 357244 - 358023 (+)
Family: CE12
Protein type: CAZyme
Protein description: Rhamnogalacturonan acetylesterase RhgT
Protein isoelectric point: 8.2396
Protein molecular weight: 29192.59
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001376_5|CGC6
Gene ID: MGYG000001376_02349
Location and strand information: 358023 - 359654 (+)
Family: GH43|GH43_10
Protein type: CAZyme
Protein description: Non-reducing end alpha-L-arabinofuranosidase BoGH43B
Protein isoelectric point: 5.8892
Protein molecular weight: 60714.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001376_5|CGC6
Gene ID: MGYG000001376_02350
Location and strand information: 359745 - 360746 (+)
Family: null
Protein type: null
Protein description: Acetyl esterase

Gene clsuter ID: MGYG000001376_5|CGC6
Gene ID: MGYG000001376_02351
Location and strand information: 360743 - 362233 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.2169
Protein molecular weight: 54862.14
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001376_5|CGC6
Gene ID: MGYG000001376_02352
Location and strand information: 362230 - 363054 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001376_5|CGC6
Gene ID: MGYG000001376_02353
Location and strand information: 363056 - 365209 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.1757
Protein molecular weight: 80058.36
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001376_5|CGC6
Gene ID: MGYG000001376_02354
Location and strand information: 365647 - 366894 (-)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 7.7133
Protein molecular weight: 47448.28
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001376_5|CGC6
Gene ID: MGYG000001376_02355
Location and strand information: 366956 - 368224 (-)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.1188
Protein molecular weight: 47369.63
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001376_5|CGC6
Gene ID: MGYG000001376_02356
Location and strand information: 368237 - 368551 (-)
Family: null
Protein type: null
Protein description: L-rhamnose mutarotase

Gene clsuter ID: MGYG000001376_5|CGC6
Gene ID: MGYG000001376_02357
Location and strand information: 368561 - 370711 (-)
Family: CE12|GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.3518
Protein molecular weight: 80951.97
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001376_5|CGC6
Gene ID: MGYG000001376_02358
Location and strand information: 370800 - 372029 (-)
Family: null
Protein type: null
Protein description: Oligogalacturonate lyase

Gene clsuter ID: MGYG000001376_5|CGC6
Gene ID: MGYG000001376_02359
Location and strand information: 372029 - 374059 (-)
Family: PL11_1|CBM35|CBM2|PL11
Protein type: CAZyme
Protein description: Rhamnogalacturonan exolyase YesX
Protein isoelectric point: 4.8543
Protein molecular weight: 76117.96
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001376_5|CGC6
Gene ID: MGYG000001376_02360
Location and strand information: 374151 - 376217 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001376_5|CGC6
Gene ID: MGYG000001376_02361
Location and strand information: 376236 - 379358 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001376_5|CGC6
Gene ID: MGYG000001376_02362
Location and strand information: 379727 - 384055 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001376_5|CGC6
Gene ID: MGYG000001376_02363
Location and strand information: 384499 - 385449 (-)
Family: CBM32|GH43_18|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.9994
Protein molecular weight: 36139.06
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001376_5|CGC6
Gene ID: MGYG000001376_02364
Location and strand information: 385907 - 386659 (-)
Family: CE12
Protein type: CAZyme
Protein description: Rhamnogalacturonan acetylesterase RhgT
Protein isoelectric point: 7.4147
Protein molecular weight: 28462.67
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001376_5|CGC6
Gene ID: MGYG000001376_02365
Location and strand information: 386693 - 388765 (-)
Family: GH42
Protein type: CAZyme
Protein description: Beta-galactosidase BgaA
Protein isoelectric point: 6.3386
Protein molecular weight: 80204.46
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001376_5|CGC6
Gene ID: MGYG000001376_02366
Location and strand information: 388762 - 391548 (-)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.7761
Protein molecular weight: 105216.4
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001376_5|CGC6
Gene ID: MGYG000001376_02367
Location and strand information: 391553 - 394423 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 7.0312
Protein molecular weight: 109980.04
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001376_02344	GH28_e61
MGYG000001376_02345	GH105_e23\|3.2.1.-	pectin
MGYG000001376_02346	PL1_e44\|4.2.2.2	pectin
MGYG000001376_02347	CE8_e34
MGYG000001376_02348
MGYG000001376_02349	GH43_e184\|3.2.1.55	xylan
MGYG000001376_02351	GH28_e52\|3.2.1.-	pectin
MGYG000001376_02353	GH28_e26\|3.2.1.-	pectin
MGYG000001376_02354	GH105_e29
MGYG000001376_02355	CE12_e46
MGYG000001376_02357	GH105_e35\|CE12_e25\|3.2.1.172	pectin
MGYG000001376_02359	PL11_e0\|CBM35_e56\|CBM2_e72\|4.2.2.23	pectin
MGYG000001376_02363	GH43_e26\|CBM32_e74\|3.2.1.55	xylan
MGYG000001376_02364	CE12_e9
MGYG000001376_02365	GH42_e7
MGYG000001376_02366	GH106_e0\|3.2.1.174	pectin
MGYG000001376_02367	GH2_e63\|3.2.1.23	beta-galactan

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001376_02341	TonB-dependent receptor SusC	TC	344901	348149	+	1.B.14.6.1
MGYG000001376_02342	hypothetical protein	null	348172	350100	+	SusD-like_3\| SusD_RagB
MGYG000001376_02343	hypothetical protein	null	350084	351739	+	DUF4957\| DUF5123
MGYG000001376_02344	hypothetical protein	CAZyme	351806	353443	+	GH28
MGYG000001376_02345	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	353453	354619	+	GH105
MGYG000001376_02346	hypothetical protein	CAZyme	354627	356000	+	PL1\| PL1_2
MGYG000001376_02347	Pectinesterase A	CAZyme	356010	356969	+	CE8
MGYG000001376_02348	Rhamnogalacturonan acetylesterase RhgT	CAZyme	357244	358023	+	CE12
MGYG000001376_02349	Non-reducing end alpha-L-arabinofuranosidase BoGH43B	CAZyme	358023	359654	+	GH43\| GH43_10
MGYG000001376_02350	Acetyl esterase	null	359745	360746	+	BD-FAE
MGYG000001376_02351	hypothetical protein	CAZyme	360743	362233	-	GH28
MGYG000001376_02352	hypothetical protein	null	362230	363054	-	No domain
MGYG000001376_02353	hypothetical protein	CAZyme	363056	365209	-	GH28
MGYG000001376_02354	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	365647	366894	-	GH105
MGYG000001376_02355	hypothetical protein	CAZyme	366956	368224	-	CE12
MGYG000001376_02356	L-rhamnose mutarotase	null	368237	368551	-	rhaM
MGYG000001376_02357	hypothetical protein	CAZyme	368561	370711	-	CE12\| GH105
MGYG000001376_02358	Oligogalacturonate lyase	null	370800	372029	-	Pectate_lyase22
MGYG000001376_02359	Rhamnogalacturonan exolyase YesX	CAZyme	372029	374059	-	PL11_1\| CBM35\| CBM2\| PL11
MGYG000001376_02360	hypothetical protein	null	374151	376217	-	SusD-like_3\| SusD_RagB
MGYG000001376_02361	TonB-dependent receptor SusC	TC	376236	379358	-	1.B.14.6.1
MGYG000001376_02362	Sensor histidine kinase RcsC	TF	379727	384055	+	HTH_AraC
MGYG000001376_02363	hypothetical protein	CAZyme	384499	385449	-	CBM32\| GH43_18\| GH43
MGYG000001376_02364	Rhamnogalacturonan acetylesterase RhgT	CAZyme	385907	386659	-	CE12
MGYG000001376_02365	Beta-galactosidase BgaA	CAZyme	386693	388765	-	GH42
MGYG000001376_02366	hypothetical protein	CAZyme	388762	391548	-	GH106
MGYG000001376_02367	Beta-galactosidase	CAZyme	391553	394423	-	GH2
Protein ID	Protein Name	Type	Start	End	Strand	Signature