dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001378_1|CGC19
Gene ID: MGYG000001378_00565
Location and strand information: 844289 - 845521 (-)
Family: 9.B.156.3.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_1|CGC19
Gene ID: MGYG000001378_00566
Location and strand information: 845648 - 846679 (+)
Family: AAA
Protein type: STP
Protein description: Holliday junction ATP-dependent DNA helicase RuvB

Gene clsuter ID: MGYG000001378_1|CGC19
Gene ID: MGYG000001378_00567
Location and strand information: 846742 - 847518 (+)
Family: CE1|CE0
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.798
Protein molecular weight: 28990.49
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_1|CGC19
Gene ID: MGYG000001378_00568
Location and strand information: 847549 - 849045 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_1|CGC19
Gene ID: MGYG000001378_00569
Location and strand information: 849048 - 850403 (+)
Family: 9.B.145.1.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_1|CGC19
Gene ID: MGYG000001378_00570
Location and strand information: 850423 - 852564 (+)
Family: null
Protein type: null
Protein description: Dipeptidyl-peptidase 7

Gene clsuter ID: MGYG000001378_1|CGC19
Gene ID: MGYG000001378_00571
Location and strand information: 852593 - 853459 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_1|CGC19
Gene ID: MGYG000001378_00572
Location and strand information: 853603 - 856260 (+)
Family: GH78|CBM67
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.2302
Protein molecular weight: 100566.35
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_1|CGC19
Gene ID: MGYG000001378_00573
Location and strand information: 856281 - 860333 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001378_1|CGC19
Gene ID: MGYG000001378_00574
Location and strand information: 860567 - 864175 (+)
Family: GH38
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.1886
Protein molecular weight: 134797.2
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_1|CGC19
Gene ID: MGYG000001378_00575
Location and strand information: 864610 - 868866 (-)
Family: CBM32|GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.3479
Protein molecular weight: 160794.43
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_1|CGC19
Gene ID: MGYG000001378_00576
Location and strand information: 868876 - 870837 (-)
Family: GH97
Protein type: CAZyme
Protein description: Retaining alpha-galactosidase
Protein isoelectric point: 6.5707
Protein molecular weight: 75183.59
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_1|CGC19
Gene ID: MGYG000001378_00577
Location and strand information: 870988 - 872448 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6762
Protein molecular weight: 53646.91
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_1|CGC19
Gene ID: MGYG000001378_00578
Location and strand information: 872454 - 873986 (-)
Family: CBM88|CE0
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0566
Protein molecular weight: 56231.39
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_1|CGC19
Gene ID: MGYG000001378_00579
Location and strand information: 874005 - 875234 (-)
Family: GH76
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.563
Protein molecular weight: 47586.23
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_1|CGC19
Gene ID: MGYG000001378_00580
Location and strand information: 875317 - 876666 (-)
Family: CBM32
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.3236
Protein molecular weight: 50430.36
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_1|CGC19
Gene ID: MGYG000001378_00581
Location and strand information: 876690 - 878633 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_1|CGC19
Gene ID: MGYG000001378_00582
Location and strand information: 878653 - 881823 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001378_1|CGC19
Gene ID: MGYG000001378_00583
Location and strand information: 881842 - 884052 (-)
Family: GH3
Protein type: CAZyme
Protein description: Beta-glucosidase BoGH3B
Protein isoelectric point: 7.7072
Protein molecular weight: 82110.38
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_1|CGC19
Gene ID: MGYG000001378_00584
Location and strand information: 884241 - 885923 (-)
Family: CBM32|GH43_28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.1497
Protein molecular weight: 64002.46
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_1|CGC19
Gene ID: MGYG000001378_00585
Location and strand information: 886143 - 887342 (-)
Family: GH76
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.558
Protein molecular weight: 45939.03
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_1|CGC19
Gene ID: MGYG000001378_00586
Location and strand information: 887795 - 889729 (-)
Family: 3.A.18.1.1
Protein type: TC
Protein description: ATP-dependent RNA helicase DeaD

Gene clsuter ID: MGYG000001378_1|CGC19
Gene ID: MGYG000001378_00587
Location and strand information: 889804 - 890865 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_1|CGC19
Gene ID: MGYG000001378_00588
Location and strand information: 891029 - 892498 (-)
Family: GH125
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.5895
Protein molecular weight: 55481.48
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_1|CGC19
Gene ID: MGYG000001378_00589
Location and strand information: 892534 - 893697 (-)
Family: GH76
Protein type: CAZyme
Protein description: Cellobiose 2-epimerase
Protein isoelectric point: 7.0118
Protein molecular weight: 44821.56
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001378_00567	CE0_e20
MGYG000001378_00572	GH78_e48
MGYG000001378_00574	GH38_e31\|3.2.1.113\|3.2.1.-	hostglycan\|alpha-mannan
MGYG000001378_00575	GH2_e119
MGYG000001378_00576	GH97_e20\|3.2.1.22	alpha-glucan
MGYG000001378_00577
MGYG000001378_00578
MGYG000001378_00579
MGYG000001378_00580
MGYG000001378_00583	GH3_e0\|3.2.1.37\|3.2.1.21\|3.2.1.-	xylan\|beta-glucan
MGYG000001378_00584
MGYG000001378_00585	GH76_e1\|3.2.1.101	alpha-mannan
MGYG000001378_00588	GH125_e1\|3.2.1.-	alpha-mannan
MGYG000001378_00589	GH76_e1\|3.2.1.101	alpha-mannan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is alpha-mannan

Substrate predicted by dbCAN-PUL is alpha-mannan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001378_00565	hypothetical protein	TC	844289	845521	-	9.B.156.3.1
MGYG000001378_00566	Holliday junction ATP-dependent DNA helicase RuvB	STP	845648	846679	+	AAA
MGYG000001378_00567	hypothetical protein	CAZyme	846742	847518	+	CE1\| CE0
MGYG000001378_00568	hypothetical protein	null	847549	849045	+	Polysacc_synt_C
MGYG000001378_00569	hypothetical protein	TC	849048	850403	+	9.B.145.1.2
MGYG000001378_00570	Dipeptidyl-peptidase 7	null	850423	852564	+	Peptidase_S46
MGYG000001378_00571	hypothetical protein	null	852593	853459	-	EamA\| EamA
MGYG000001378_00572	hypothetical protein	CAZyme	853603	856260	+	GH78\| CBM67
MGYG000001378_00573	Sensor histidine kinase RcsC	TF	856281	860333	-	HTH_AraC
MGYG000001378_00574	hypothetical protein	CAZyme	860567	864175	+	GH38
MGYG000001378_00575	Beta-galactosidase	CAZyme	864610	868866	-	CBM32\| GH2
MGYG000001378_00576	Retaining alpha-galactosidase	CAZyme	868876	870837	-	GH97
MGYG000001378_00577	hypothetical protein	CAZyme	870988	872448	-	GH28
MGYG000001378_00578	hypothetical protein	CAZyme	872454	873986	-	CBM88\| CE0
MGYG000001378_00579	hypothetical protein	CAZyme	874005	875234	-	GH76
MGYG000001378_00580	hypothetical protein	CAZyme	875317	876666	-	CBM32
MGYG000001378_00581	hypothetical protein	null	876690	878633	-	SusD-like_3\| SusD_RagB
MGYG000001378_00582	TonB-dependent receptor SusC	TC	878653	881823	-	1.B.14.6.1
MGYG000001378_00583	Beta-glucosidase BoGH3B	CAZyme	881842	884052	-	GH3
MGYG000001378_00584	hypothetical protein	CAZyme	884241	885923	-	CBM32\| GH43_28
MGYG000001378_00585	hypothetical protein	CAZyme	886143	887342	-	GH76
MGYG000001378_00586	ATP-dependent RNA helicase DeaD	TC	887795	889729	-	3.A.18.1.1
MGYG000001378_00587	hypothetical protein	null	889804	890865	-	Y_phosphatase3
MGYG000001378_00588	hypothetical protein	CAZyme	891029	892498	-	GH125
MGYG000001378_00589	Cellobiose 2-epimerase	CAZyme	892534	893697	-	GH76
Protein ID	Protein Name	Type	Start	End	Strand	Signature