dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001378_4|CGC6
Gene ID: MGYG000001378_02395
Location and strand information: 249827 - 251725 (+)
Family: 2.A.21.9.2
Protein type: TC
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001378_4|CGC6
Gene ID: MGYG000001378_02396
Location and strand information: 252037 - 252612 (-)
Family: GerE
Protein type: TF
Protein description: ECF RNA polymerase sigma-E factor

Gene clsuter ID: MGYG000001378_4|CGC6
Gene ID: MGYG000001378_02397
Location and strand information: 252747 - 253769 (+)
Family: FecR
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_4|CGC6
Gene ID: MGYG000001378_02398
Location and strand information: 253938 - 257489 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_4|CGC6
Gene ID: MGYG000001378_02399
Location and strand information: 257499 - 259298 (+)
Family: TPR_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_4|CGC6
Gene ID: MGYG000001378_02400
Location and strand information: 259342 - 261201 (+)
Family: PL35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.8882
Protein molecular weight: 70149.56
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_4|CGC6
Gene ID: MGYG000001378_02401
Location and strand information: 261206 - 262399 (+)
Family: GH88
Protein type: CAZyme
Protein description: Unsaturated chondroitin disaccharide hydrolase
Protein isoelectric point: 5.6072
Protein molecular weight: 45978.93
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_4|CGC6
Gene ID: MGYG000001378_02402
Location and strand information: 262690 - 263253 (+)
Family: GerE
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_4|CGC6
Gene ID: MGYG000001378_02403
Location and strand information: 263380 - 264414 (+)
Family: FecR
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_4|CGC6
Gene ID: MGYG000001378_02404
Location and strand information: 264527 - 267742 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001378_4|CGC6
Gene ID: MGYG000001378_02405
Location and strand information: 267774 - 269525 (+)
Family: 8.A.46.1.1
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is host glycan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001378_02395	Sensor histidine kinase RcsC	TC	249827	251725	+	2.A.21.9.2
MGYG000001378_02396	ECF RNA polymerase sigma-E factor	TF	252037	252612	-	GerE
MGYG000001378_02397	hypothetical protein	STP	252747	253769	+	FecR
MGYG000001378_02398	hypothetical protein	TC	253938	257489	+	1.B.14.6.1
MGYG000001378_02399	hypothetical protein	STP	257499	259298	+	TPR_1
MGYG000001378_02400	hypothetical protein	CAZyme	259342	261201	+	PL35
MGYG000001378_02401	Unsaturated chondroitin disaccharide hydrolase	CAZyme	261206	262399	+	GH88
MGYG000001378_02402	hypothetical protein	TF	262690	263253	+	GerE
MGYG000001378_02403	hypothetical protein	STP	263380	264414	+	FecR
MGYG000001378_02404	TonB-dependent receptor SusC	TC	264527	267742	+	1.B.14.6.1
MGYG000001378_02405	hypothetical protein	TC	267774	269525	+	8.A.46.1.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature