dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001378_8|CGC1
Gene ID: MGYG000001378_03602
Location and strand information: 23091 - 24506 (-)
Family: CBM50
Protein type: CAZyme
Protein description: Integration host factor subunit alpha
Protein isoelectric point: 4.1064
Protein molecular weight: 52255.55
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_8|CGC1
Gene ID: MGYG000001378_03603
Location and strand information: 24519 - 24791 (-)
Family: null
Protein type: null
Protein description: DNA-binding protein HU

Gene clsuter ID: MGYG000001378_8|CGC1
Gene ID: MGYG000001378_03604
Location and strand information: 24784 - 26094 (-)
Family: null
Protein type: null
Protein description: Ribosomal protein S12 methylthiotransferase RimO

Gene clsuter ID: MGYG000001378_8|CGC1
Gene ID: MGYG000001378_03605
Location and strand information: 26091 - 27050 (-)
Family: 3.A.5.1.1
Protein type: TC
Protein description: Signal recognition particle receptor FtsY

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001378_03602	Integration host factor subunit alpha	CAZyme	23091	24506	-	CBM50
MGYG000001378_03603	DNA-binding protein HU	null	24519	24791	-	Bac_DNA_binding
MGYG000001378_03604	Ribosomal protein S12 methylthiotransferase RimO	null	24784	26094	-	UPF0004\| Radical_SAM\| TRAM_2
MGYG000001378_03605	Signal recognition particle receptor FtsY	TC	26091	27050	-	3.A.5.1.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature