dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001422_3|CGC5
Gene ID: MGYG000001422_03064
Location and strand information: 350754 - 352769 (-)
Family: GH154
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.7384
Protein molecular weight: 76498
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_3|CGC5
Gene ID: MGYG000001422_03065
Location and strand information: 353143 - 357348 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001422_3|CGC5
Gene ID: MGYG000001422_03066
Location and strand information: 357570 - 360887 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001422_3|CGC5
Gene ID: MGYG000001422_03067
Location and strand information: 360903 - 362921 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001422_3|CGC5
Gene ID: MGYG000001422_03068
Location and strand information: 363028 - 364152 (+)
Family: GH43|GH16|GH43_24
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6931
Protein molecular weight: 42606.37
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_3|CGC5
Gene ID: MGYG000001422_03069
Location and strand information: 364295 - 365539 (+)
Family: GH154
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.5175
Protein molecular weight: 47454.33
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_3|CGC5
Gene ID: MGYG000001422_03070
Location and strand information: 365583 - 366878 (+)
Family: GH145|PL42
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4033
Protein molecular weight: 49979.79
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_3|CGC5
Gene ID: MGYG000001422_03071
Location and strand information: 367129 - 368277 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 5.4609
Protein molecular weight: 43841.57
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_3|CGC5
Gene ID: MGYG000001422_03072
Location and strand information: 368388 - 370328 (+)
Family: GH43_19|GH43|3.2.1.55|GH43_34
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.6903
Protein molecular weight: 73460.2
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_3|CGC5
Gene ID: MGYG000001422_03073
Location and strand information: 370387 - 373314 (+)
Family: GH43_19|GH97
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.011
Protein molecular weight: 110693.09
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_3|CGC5
Gene ID: MGYG000001422_03074
Location and strand information: 373334 - 375868 (+)
Family: GH51
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4002
Protein molecular weight: 94644.34
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_3|CGC5
Gene ID: MGYG000001422_03075
Location and strand information: 375906 - 377846 (+)
Family: GH51
Protein type: CAZyme
Protein description: Extracellular exo-alpha-L-arabinofuranosidase
Protein isoelectric point: 5.86
Protein molecular weight: 72899.71
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_3|CGC5
Gene ID: MGYG000001422_03076
Location and strand information: 377960 - 381055 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 5.9492
Protein molecular weight: 118030.7
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_3|CGC5
Gene ID: MGYG000001422_03077
Location and strand information: 381196 - 382197 (+)
Family: GH43|GH43_17
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.7249
Protein molecular weight: 38307.7
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001422_03064
MGYG000001422_03068	GH43_e135\|GH16_e47
MGYG000001422_03069
MGYG000001422_03070	GH145_e0\|3.2.1.-
MGYG000001422_03071	GH105_e2\|3.2.1.-	pectin
MGYG000001422_03072	GH43_e38\|3.2.1.55	xylan
MGYG000001422_03073	GH97_e10\|3.2.1.88\|3.2.1.22	alpha-glucan
MGYG000001422_03074	GH51_e23\|3.2.1.55	arabinan
MGYG000001422_03075	GH51_e23\|3.2.1.55	arabinan
MGYG000001422_03076	GH2_e4\|3.2.1.23	beta-galactan
MGYG000001422_03077	GH43_e181

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is arabinan

Substrate predicted by dbCAN-PUL is arabinogalactan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001422_03064	hypothetical protein	CAZyme	350754	352769	-	GH154
MGYG000001422_03065	Sensor histidine kinase RcsC	TF	353143	357348	+	HTH_AraC
MGYG000001422_03066	hypothetical protein	TC	357570	360887	+	1.B.14.6.1
MGYG000001422_03067	hypothetical protein	null	360903	362921	+	SusD-like_3\| SusD_RagB
MGYG000001422_03068	hypothetical protein	CAZyme	363028	364152	+	GH43\| GH16\| GH43_24
MGYG000001422_03069	hypothetical protein	CAZyme	364295	365539	+	GH154
MGYG000001422_03070	hypothetical protein	CAZyme	365583	366878	+	GH145\| PL42
MGYG000001422_03071	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	367129	368277	+	GH105
MGYG000001422_03072	hypothetical protein	CAZyme	368388	370328	+	GH43_19\| GH43\| 3.2.1.55\| GH43_34
MGYG000001422_03073	hypothetical protein	CAZyme	370387	373314	+	GH43_19\| GH97
MGYG000001422_03074	hypothetical protein	CAZyme	373334	375868	+	GH51
MGYG000001422_03075	Extracellular exo-alpha-L-arabinofuranosidase	CAZyme	375906	377846	+	GH51
MGYG000001422_03076	Beta-galactosidase	CAZyme	377960	381055	+	GH2
MGYG000001422_03077	hypothetical protein	CAZyme	381196	382197	+	GH43\| GH43_17
Protein ID	Protein Name	Type	Start	End	Strand	Signature