dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00467
Location and strand information: 547143 - 548090 (+)
Family: 3.A.1.3.24
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00468
Location and strand information: 548335 - 549276 (+)
Family: 3.A.1.3.24
Protein type: TC
Protein description: Membrane-bound lytic murein transglycosylase F

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00469
Location and strand information: 549567 - 550496 (+)
Family: 3.A.1.3.24
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00470
Location and strand information: 550542 - 551525 (+)
Family: 3.A.1.3.24
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00471
Location and strand information: 551538 - 552332 (+)
Family: 3.A.1.3.24
Protein type: TC
Protein description: Glutamine transport ATP-binding protein GlnQ

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00472
Location and strand information: 552526 - 554418 (+)
Family: SIS+SIS
Protein type: STP
Protein description: Glutamine--fructose-6-phosphate aminotransferase [isomerizing]

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00473
Location and strand information: 554430 - 555182 (+)
Family: null
Protein type: null
Protein description: Ribosomal large subunit pseudouridine synthase A

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00474
Location and strand information: 555344 - 556687 (+)
Family: 2.A.23.4.1
Protein type: TC
Protein description: Serine/threonine transporter SstT

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00475
Location and strand information: 556820 - 557827 (-)
Family: LacI
Protein type: TF
Protein description: Catabolite control protein A

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00476
Location and strand information: 558064 - 558993 (+)
Family: 3.A.1.1.48
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00477
Location and strand information: 559052 - 560056 (+)
Family: 3.A.1.1.48
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00478
Location and strand information: 560095 - 562164 (+)
Family: GH42
Protein type: CAZyme
Protein description: Beta-galactosidase III
Protein isoelectric point: 4.6901
Protein molecular weight: 76787.97
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00479
Location and strand information: 562263 - 563822 (-)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 4.7702
Protein molecular weight: 57367.95
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00480
Location and strand information: 564100 - 565458 (+)
Family: 3.A.1.1.44
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00481
Location and strand information: 565658 - 567085 (+)
Family: 3.A.1.1.48
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00482
Location and strand information: 567203 - 567973 (-)
Family: null
Protein type: null
Protein description: Type III pantothenate kinase

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00483
Location and strand information: 568041 - 569324 (-)
Family: null
Protein type: null
Protein description: Coenzyme A biosynthesis bifunctional protein CoaBC

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00484
Location and strand information: 569531 - 571186 (+)
Family: 3.A.1.5.39
Protein type: TC
Protein description: HTH-type transcriptional regulator SgrR

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00485
Location and strand information: 571197 - 572177 (+)
Family: 3.A.1.5.3
Protein type: TC
Protein description: Glutathione transport system permease protein GsiC

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00486
Location and strand information: 572174 - 573118 (+)
Family: 3.A.1.5.3
Protein type: TC
Protein description: Glutathione transport system permease protein GsiD

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00487
Location and strand information: 573115 - 573897 (+)
Family: 3.A.1.5.10
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein YejF

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00488
Location and strand information: 573897 - 574667 (+)
Family: 3.A.1.5.41
Protein type: TC
Protein description: putative D,D-dipeptide transport ATP-binding protein DdpF

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00489
Location and strand information: 575072 - 576082 (+)
Family: PALP
Protein type: STP
Protein description: Putative cystathionine beta-synthase

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00490
Location and strand information: 576162 - 577343 (+)
Family: null
Protein type: null
Protein description: Cystathionine gamma-synthase

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00491
Location and strand information: 577455 - 579404 (+)
Family: 2.A.16.2.2
Protein type: TC
Protein description: ATP-dependent DNA helicase RecQ

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00492
Location and strand information: 579571 - 580056 (+)
Family: null
Protein type: null
Protein description: S-ribosylhomocysteine lyase

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00493
Location and strand information: 580164 - 580700 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00494
Location and strand information: 580901 - 582328 (-)
Family: 2.A.3.3.22
Protein type: TC
Protein description: putative amino acid permease YhdG

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00495
Location and strand information: 582357 - 583931 (+)
Family: null
Protein type: null
Protein description: Alanine racemase

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00496
Location and strand information: 584037 - 586118 (+)
Family: null
Protein type: null
Protein description: DNA primase

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00497
Location and strand information: 586504 - 587700 (+)
Family: 2.A.45.2.6
Protein type: TC
Protein description: Inner membrane protein YbiR

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00499
Location and strand information: 588011 - 590026 (+)
Family: null
Protein type: null
Protein description: Tetracycline resistance protein TetM from transposon TnFO1

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00503
Location and strand information: 590475 - 591089 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00504
Location and strand information: 591356 - 592012 (+)
Family: 3.A.1.3.12
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00505
Location and strand information: 591999 - 592673 (+)
Family: 3.A.1.3.2
Protein type: TC
Protein description: putative glutamine ABC transporter permease protein GlnP

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00506
Location and strand information: 592666 - 593502 (+)
Family: 3.A.1.3.9
Protein type: TC
Protein description: Glutamine transport ATP-binding protein GlnQ

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00507
Location and strand information: 593584 - 594489 (+)
Family: 3.A.1.3.27
Protein type: TC
Protein description: ABC transporter glutamine-binding protein GlnH

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00508
Location and strand information: 594824 - 596947 (+)
Family: GH36
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.4438
Protein molecular weight: 78787.01
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00509
Location and strand information: 597032 - 598033 (-)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional repressor CytR

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00510
Location and strand information: 598182 - 599432 (+)
Family: 3.A.1.1.40
Protein type: TC
Protein description: Multiple sugar-binding protein

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00511
Location and strand information: 599582 - 600487 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: sn-glycerol-3-phosphate transport system permease protein UgpA

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00512
Location and strand information: 600502 - 601350 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00513
Location and strand information: 601396 - 603378 (+)
Family: GH127
Protein type: CAZyme
Protein description: Non-reducing end beta-L-arabinofuranosidase
Protein isoelectric point: 4.5268
Protein molecular weight: 73811.68
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00514
Location and strand information: 603630 - 606851 (+)
Family: CBM35|GH39
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6794
Protein molecular weight: 114389.85
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00515
Location and strand information: 607165 - 608490 (+)
Family: 2.A.1.2.93
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00516
Location and strand information: 608768 - 609790 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00517
Location and strand information: 609830 - 610705 (+)
Family: 3.A.1.24.5
Protein type: TC
Protein description: Methionine-binding lipoprotein MetQ

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00518
Location and strand information: 610841 - 611902 (+)
Family: 3.A.1.24.1
Protein type: TC
Protein description: Methionine import ATP-binding protein MetN

Gene clsuter ID: MGYG000001490_1|CGC7
Gene ID: MGYG000001490_00519
Location and strand information: 611908 - 612567 (+)
Family: 3.A.1.24.5
Protein type: TC
Protein description: Methionine import system permease protein MetP

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is galactomannan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001490_00467	hypothetical protein	TC	547143	548090	+	3.A.1.3.24
MGYG000001490_00468	Membrane-bound lytic murein transglycosylase F	TC	548335	549276	+	3.A.1.3.24
MGYG000001490_00469	hypothetical protein	TC	549567	550496	+	3.A.1.3.24
MGYG000001490_00470	hypothetical protein	TC	550542	551525	+	3.A.1.3.24
MGYG000001490_00471	Glutamine transport ATP-binding protein GlnQ	TC	551538	552332	+	3.A.1.3.24
MGYG000001490_00472	Glutamine--fructose-6-phosphate aminotransferase [isomerizing]	STP	552526	554418	+	SIS\| SIS
MGYG000001490_00473	Ribosomal large subunit pseudouridine synthase A	null	554430	555182	+	PseudoU_synth_2
MGYG000001490_00474	Serine/threonine transporter SstT	TC	555344	556687	+	2.A.23.4.1
MGYG000001490_00475	Catabolite control protein A	TF	556820	557827	-	LacI
MGYG000001490_00476	Lactose transport system permease protein LacF	TC	558064	558993	+	3.A.1.1.48
MGYG000001490_00477	L-arabinose transport system permease protein AraQ	TC	559052	560056	+	3.A.1.1.48
MGYG000001490_00478	Beta-galactosidase III	CAZyme	560095	562164	+	GH42
MGYG000001490_00479	Intracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	562263	563822	-	GH51
MGYG000001490_00480	hypothetical protein	TC	564100	565458	+	3.A.1.1.44
MGYG000001490_00481	hypothetical protein	TC	565658	567085	+	3.A.1.1.48
MGYG000001490_00482	Type III pantothenate kinase	null	567203	567973	-	Pan_kinase
MGYG000001490_00483	Coenzyme A biosynthesis bifunctional protein CoaBC	null	568041	569324	-	Flavoprotein\| DFP
MGYG000001490_00484	HTH-type transcriptional regulator SgrR	TC	569531	571186	+	3.A.1.5.39
MGYG000001490_00485	Glutathione transport system permease protein GsiC	TC	571197	572177	+	3.A.1.5.3
MGYG000001490_00486	Glutathione transport system permease protein GsiD	TC	572174	573118	+	3.A.1.5.3
MGYG000001490_00487	putative ABC transporter ATP-binding protein YejF	TC	573115	573897	+	3.A.1.5.10
MGYG000001490_00488	putative D,D-dipeptide transport ATP-binding protein DdpF	TC	573897	574667	+	3.A.1.5.41
MGYG000001490_00489	Putative cystathionine beta-synthase	STP	575072	576082	+	PALP
MGYG000001490_00490	Cystathionine gamma-synthase	null	576162	577343	+	Cys_Met_Meta_PP
MGYG000001490_00491	ATP-dependent DNA helicase RecQ	TC	577455	579404	+	2.A.16.2.2
MGYG000001490_00492	S-ribosylhomocysteine lyase	null	579571	580056	+	LuxS
MGYG000001490_00493	hypothetical protein	null	580164	580700	+	No domain
MGYG000001490_00494	putative amino acid permease YhdG	TC	580901	582328	-	2.A.3.3.22
MGYG000001490_00495	Alanine racemase	null	582357	583931	+	Ala_racemase_N\| Ala_racemase_C
MGYG000001490_00496	DNA primase	null	584037	586118	+	zf-CHC2\| Toprim_N\| Toprim_4\| DnaB_bind
MGYG000001490_00497	Inner membrane protein YbiR	TC	586504	587700	+	2.A.45.2.6
MGYG000001490_00499	Tetracycline resistance protein TetM from transposon TnFO1	null	588011	590026	+	GTP_EFTU\| EFG_IV\| EFG_C
MGYG000001490_00503	hypothetical protein	null	590475	591089	-	Acetyltransf_1
MGYG000001490_00504	hypothetical protein	TC	591356	592012	+	3.A.1.3.12
MGYG000001490_00505	putative glutamine ABC transporter permease protein GlnP	TC	591999	592673	+	3.A.1.3.2
MGYG000001490_00506	Glutamine transport ATP-binding protein GlnQ	TC	592666	593502	+	3.A.1.3.9
MGYG000001490_00507	ABC transporter glutamine-binding protein GlnH	TC	593584	594489	+	3.A.1.3.27
MGYG000001490_00508	hypothetical protein	CAZyme	594824	596947	+	GH36
MGYG000001490_00509	HTH-type transcriptional repressor CytR	TF	597032	598033	-	LacI
MGYG000001490_00510	Multiple sugar-binding protein	TC	598182	599432	+	3.A.1.1.40
MGYG000001490_00511	sn-glycerol-3-phosphate transport system permease protein UgpA	TC	599582	600487	+	3.A.1.1.11
MGYG000001490_00512	L-arabinose transport system permease protein AraQ	TC	600502	601350	+	3.A.1.1.11
MGYG000001490_00513	Non-reducing end beta-L-arabinofuranosidase	CAZyme	601396	603378	+	GH127
MGYG000001490_00514	hypothetical protein	CAZyme	603630	606851	+	CBM35\| GH39
MGYG000001490_00515	hypothetical protein	TC	607165	608490	+	2.A.1.2.93
MGYG000001490_00516	hypothetical protein	null	608768	609790	+	ApbA\| ApbA_C
MGYG000001490_00517	Methionine-binding lipoprotein MetQ	TC	609830	610705	+	3.A.1.24.5
MGYG000001490_00518	Methionine import ATP-binding protein MetN	TC	610841	611902	+	3.A.1.24.1
MGYG000001490_00519	Methionine import system permease protein MetP	TC	611908	612567	+	3.A.1.24.5
Protein ID	Protein Name	Type	Start	End	Strand	Signature