dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001507_1|CGC48
Gene ID: MGYG000001507_03447
Location and strand information: 3589214 - 3591751 (-)
Family: 9.A.11.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001507_1|CGC48
Gene ID: MGYG000001507_03448
Location and strand information: 3591832 - 3592257 (-)
Family: 9.A.11.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001507_1|CGC48
Gene ID: MGYG000001507_03449
Location and strand information: 3592254 - 3592913 (-)
Family: 9.A.11.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001507_1|CGC48
Gene ID: MGYG000001507_03450
Location and strand information: 3593115 - 3594164 (-)
Family: GH53
Protein type: CAZyme
Protein description: Arabinogalactan endo-beta-1,4-galactanase
Protein isoelectric point: 4.3294
Protein molecular weight: 39663.41
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001507_1|CGC48
Gene ID: MGYG000001507_03451
Location and strand information: 3594171 - 3595049 (-)
Family: 3.A.1.1.9
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001507_1|CGC48
Gene ID: MGYG000001507_03452
Location and strand information: 3595074 - 3595964 (-)
Family: 3.A.1.1.9
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000001507_1|CGC48
Gene ID: MGYG000001507_03453
Location and strand information: 3596211 - 3597905 (-)
Family: 3.A.1.1.9
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001507_1|CGC48
Gene ID: MGYG000001507_03454
Location and strand information: 3598018 - 3599256 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000001507_1|CGC48
Gene ID: MGYG000001507_03455
Location and strand information: 3599464 - 3601236 (-)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001507_1|CGC48
Gene ID: MGYG000001507_03456
Location and strand information: 3601553 - 3602512 (-)
Family: 2.A.7.3.42
Protein type: TC
Protein description: Riboflavin transporter ImpX

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is beta-galactan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001507_03447	hypothetical protein	TC	3589214	3591751	-	9.A.11.1.1
MGYG000001507_03448	hypothetical protein	TC	3591832	3592257	-	9.A.11.1.1
MGYG000001507_03449	hypothetical protein	TC	3592254	3592913	-	9.A.11.1.1
MGYG000001507_03450	Arabinogalactan endo-beta-1,4-galactanase	CAZyme	3593115	3594164	-	GH53
MGYG000001507_03451	hypothetical protein	TC	3594171	3595049	-	3.A.1.1.9
MGYG000001507_03452	putative multiple-sugar transport system permease YteP	TC	3595074	3595964	-	3.A.1.1.9
MGYG000001507_03453	hypothetical protein	TC	3596211	3597905	-	3.A.1.1.9
MGYG000001507_03454	HTH-type transcriptional activator RhaR	TF	3598018	3599256	-	HTH_AraC+HTH_AraC
MGYG000001507_03455	hypothetical protein	TC	3599464	3601236	-	8.A.59.2.1
MGYG000001507_03456	Riboflavin transporter ImpX	TC	3601553	3602512	-	2.A.7.3.42
Protein ID	Protein Name	Type	Start	End	Strand	Signature