dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001514_12|CGC22
Gene ID: MGYG000001514_02616
Location and strand information: 1182460 - 1183344 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001514_12|CGC22
Gene ID: MGYG000001514_02617
Location and strand information: 1183674 - 1184654 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000001514_12|CGC22
Gene ID: MGYG000001514_02618
Location and strand information: 1184755 - 1186269 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: Lipoprotein LipO

Gene clsuter ID: MGYG000001514_12|CGC22
Gene ID: MGYG000001514_02619
Location and strand information: 1186374 - 1187510 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 6.0196
Protein molecular weight: 43877.57
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001514_12|CGC22
Gene ID: MGYG000001514_02620
Location and strand information: 1187533 - 1188900 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0305
Protein molecular weight: 50030.26
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001514_12|CGC22
Gene ID: MGYG000001514_02621
Location and strand information: 1188980 - 1190563 (+)
Family: GH43_11|GH43
Protein type: CAZyme
Protein description: Beta-xylosidase
Protein isoelectric point: 6.0884
Protein molecular weight: 59715.41
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001514_12|CGC22
Gene ID: MGYG000001514_02622
Location and strand information: 1190674 - 1191525 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000001514_12|CGC22
Gene ID: MGYG000001514_02623
Location and strand information: 1191691 - 1193079 (+)
Family: GH4
Protein type: CAZyme
Protein description: putative 6-phospho-beta-glucosidase
Protein isoelectric point: 4.8464
Protein molecular weight: 52457.02
NCBI Blastp with this gene.
Protein sequence: copy AA seq

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001514_02616	L-arabinose transport system permease protein AraQ	TC	1182460	1183344	-	3.A.1.1.29
MGYG000001514_02617	putative multiple-sugar transport system permease YteP	TC	1183674	1184654	+	3.A.1.1.10
MGYG000001514_02618	Lipoprotein LipO	STP	1184755	1186269	+	SBP_bac_1
MGYG000001514_02619	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	1186374	1187510	+	GH105
MGYG000001514_02620	hypothetical protein	CAZyme	1187533	1188900	+	GH28
MGYG000001514_02621	Beta-xylosidase	CAZyme	1188980	1190563	+	GH43_11\| GH43
MGYG000001514_02622	HTH-type transcriptional activator RhaS	TF	1190674	1191525	-	HTH_AraC+HTH_AraC
MGYG000001514_02623	putative 6-phospho-beta-glucosidase	CAZyme	1191691	1193079	+	GH4
Protein ID	Protein Name	Type	Start	End	Strand	Signature