dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001522_5|CGC17
Gene ID: MGYG000001522_01930
Location and strand information: 1096994 - 1097893 (+)
Family: 3.A.1.1.7
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000001522_5|CGC17
Gene ID: MGYG000001522_01931
Location and strand information: 1097902 - 1098723 (+)
Family: 3.A.1.1.41
Protein type: TC
Protein description: Trehalose transport system permease protein SugB

Gene clsuter ID: MGYG000001522_5|CGC17
Gene ID: MGYG000001522_01932
Location and strand information: 1098960 - 1100891 (+)
Family: GH31
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.609
Protein molecular weight: 72758.93
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001522_5|CGC17
Gene ID: MGYG000001522_01933
Location and strand information: 1101061 - 1101522 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001522_5|CGC17
Gene ID: MGYG000001522_01934
Location and strand information: 1101600 - 1102664 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001522_5|CGC17
Gene ID: MGYG000001522_01935
Location and strand information: 1102673 - 1104166 (-)
Family: 3.D.2.1.1
Protein type: TC
Protein description: NAD(P) transhydrogenase subunit beta

Gene clsuter ID: MGYG000001522_5|CGC17
Gene ID: MGYG000001522_01936
Location and strand information: 1104179 - 1105732 (-)
Family: 3.D.2.1.1
Protein type: TC
Protein description: NAD(P) transhydrogenase subunit alpha

Gene clsuter ID: MGYG000001522_5|CGC17
Gene ID: MGYG000001522_01937
Location and strand information: 1105939 - 1106424 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001522_5|CGC17
Gene ID: MGYG000001522_01938
Location and strand information: 1106480 - 1108036 (-)
Family: GH36
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1121
Protein molecular weight: 58216.68
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001522_5|CGC17
Gene ID: MGYG000001522_01939
Location and strand information: 1108214 - 1109590 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001522_5|CGC17
Gene ID: MGYG000001522_01940
Location and strand information: 1109649 - 1110593 (-)
Family: 3.A.1.1.36
Protein type: TC
Protein description: Trehalose transport system permease protein SugB

Gene clsuter ID: MGYG000001522_5|CGC17
Gene ID: MGYG000001522_01941
Location and strand information: 1110598 - 1111527 (-)
Family: 3.A.1.1.7
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000001522_5|CGC17
Gene ID: MGYG000001522_01942
Location and strand information: 1111623 - 1112789 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001522_5|CGC17
Gene ID: MGYG000001522_01943
Location and strand information: 1112930 - 1113565 (+)
Family: 3.A.1.30.1
Protein type: TC
Protein description: Putative HMP/thiamine permease protein YkoE

Gene clsuter ID: MGYG000001522_5|CGC17
Gene ID: MGYG000001522_01944
Location and strand information: 1113562 - 1115997 (+)
Family: 3.A.1.30.1
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001522_01930	Lactose transport system permease protein LacF	TC	1096994	1097893	+	3.A.1.1.7
MGYG000001522_01931	Trehalose transport system permease protein SugB	TC	1097902	1098723	+	3.A.1.1.41
MGYG000001522_01932	hypothetical protein	CAZyme	1098960	1100891	+	GH31
MGYG000001522_01933	hypothetical protein	null	1101061	1101522	+	YjgF_endoribonc
MGYG000001522_01934	hypothetical protein	null	1101600	1102664	+	Epimerase
MGYG000001522_01935	NAD(P) transhydrogenase subunit beta	TC	1102673	1104166	-	3.D.2.1.1
MGYG000001522_01936	NAD(P) transhydrogenase subunit alpha	TC	1104179	1105732	-	3.D.2.1.1
MGYG000001522_01937	hypothetical protein	null	1105939	1106424	+	AHSA1
MGYG000001522_01938	hypothetical protein	CAZyme	1106480	1108036	-	GH36
MGYG000001522_01939	hypothetical protein	STP	1108214	1109590	-	SBP_bac_1
MGYG000001522_01940	Trehalose transport system permease protein SugB	TC	1109649	1110593	-	3.A.1.1.36
MGYG000001522_01941	Lactose transport system permease protein LacF	TC	1110598	1111527	-	3.A.1.1.7
MGYG000001522_01942	hypothetical protein	null	1111623	1112789	+	ROK
MGYG000001522_01943	Putative HMP/thiamine permease protein YkoE	TC	1112930	1113565	+	3.A.1.30.1
MGYG000001522_01944	Vitamin B12 import ATP-binding protein BtuD	TC	1113562	1115997	+	3.A.1.30.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature