dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001536_10|CGC8
Gene ID: MGYG000001536_01021
Location and strand information: 555615 - 556844 (-)
Family: 2.A.42.2.5
Protein type: TC
Protein description: Inner membrane transport protein YqeG

Gene clsuter ID: MGYG000001536_10|CGC8
Gene ID: MGYG000001536_01022
Location and strand information: 557100 - 558278 (+)
Family: null
Protein type: null
Protein description: Acetyl-CoA acetyltransferase

Gene clsuter ID: MGYG000001536_10|CGC8
Gene ID: MGYG000001536_01023
Location and strand information: 558592 - 559275 (+)
Family: 1.B.35.1.5
Protein type: TC
Protein description: Oligogalacturonate-specific porin KdgM

Gene clsuter ID: MGYG000001536_10|CGC8
Gene ID: MGYG000001536_01024
Location and strand information: 559455 - 560630 (-)
Family: PL22_1|PL22
Protein type: CAZyme
Protein description: Oligogalacturonate lyase
Protein isoelectric point: 5.8496
Protein molecular weight: 44279.69
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001536_10|CGC8
Gene ID: MGYG000001536_01025
Location and strand information: 561063 - 561917 (+)
Family: null
Protein type: null
Protein description: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase

Gene clsuter ID: MGYG000001536_10|CGC8
Gene ID: MGYG000001536_01026
Location and strand information: 561977 - 562738 (+)
Family: null
Protein type: null
Protein description: 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase

Gene clsuter ID: MGYG000001536_10|CGC8
Gene ID: MGYG000001536_01027
Location and strand information: 563041 - 564456 (+)
Family: 2.A.1.1.2
Protein type: TC
Protein description: Arabinose-proton symporter

Gene clsuter ID: MGYG000001536_10|CGC8
Gene ID: MGYG000001536_01028
Location and strand information: 564549 - 565835 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Putative ABC transporter substrate-binding protein YesO

Gene clsuter ID: MGYG000001536_10|CGC8
Gene ID: MGYG000001536_01029
Location and strand information: 565849 - 566976 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Trehalose import ATP-binding protein SugC

Gene clsuter ID: MGYG000001536_10|CGC8
Gene ID: MGYG000001536_01030
Location and strand information: 566989 - 567891 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001536_10|CGC8
Gene ID: MGYG000001536_01031
Location and strand information: 567884 - 568774 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacF

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001536_01021	Inner membrane transport protein YqeG	TC	555615	556844	-	2.A.42.2.5
MGYG000001536_01022	Acetyl-CoA acetyltransferase	null	557100	558278	+	Thiolase_N\| Thiolase_C
MGYG000001536_01023	Oligogalacturonate-specific porin KdgM	TC	558592	559275	+	1.B.35.1.5
MGYG000001536_01024	Oligogalacturonate lyase	CAZyme	559455	560630	-	PL22_1\| PL22
MGYG000001536_01025	4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase	null	561063	561917	+	KduI
MGYG000001536_01026	2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase	null	561977	562738	+	adh_short_C2
MGYG000001536_01027	Arabinose-proton symporter	TC	563041	564456	+	2.A.1.1.2
MGYG000001536_01028	Putative ABC transporter substrate-binding protein YesO	TC	564549	565835	-	3.A.1.1.11
MGYG000001536_01029	Trehalose import ATP-binding protein SugC	TC	565849	566976	-	3.A.1.1.11
MGYG000001536_01030	L-arabinose transport system permease protein AraQ	TC	566989	567891	-	3.A.1.1.11
MGYG000001536_01031	Lactose transport system permease protein LacF	TC	567884	568774	-	3.A.1.1.11
Protein ID	Protein Name	Type	Start	End	Strand	Signature