dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001560_1|CGC6
Gene ID: MGYG000001560_00403
Location and strand information: 485230 - 489138 (-)
Family: GH78|CBM67
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.0369
Protein molecular weight: 142568.13
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001560_1|CGC6
Gene ID: MGYG000001560_00404
Location and strand information: 489502 - 491703 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000001560_1|CGC6
Gene ID: MGYG000001560_00405
Location and strand information: 491996 - 497260 (+)
Family: GH78|CBM67
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.1462
Protein molecular weight: 191902.14
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001560_1|CGC6
Gene ID: MGYG000001560_00406
Location and strand information: 498323 - 499681 (-)
Family: 2.A.66.1.32
Protein type: TC
Protein description: Multidrug export protein MepA

Gene clsuter ID: MGYG000001560_1|CGC6
Gene ID: MGYG000001560_00407
Location and strand information: 499800 - 500327 (+)
Family: PadR
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001560_1|CGC6
Gene ID: MGYG000001560_00408
Location and strand information: 500416 - 501102 (+)
Family: 3.A.1.122.14
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein

Gene clsuter ID: MGYG000001560_1|CGC6
Gene ID: MGYG000001560_00409
Location and strand information: 501092 - 503653 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001560_1|CGC6
Gene ID: MGYG000001560_00410
Location and strand information: 503721 - 504401 (+)
Family: Trans_reg_C
Protein type: TF
Protein description: Transcriptional regulatory protein CseB

Gene clsuter ID: MGYG000001560_1|CGC6
Gene ID: MGYG000001560_00411
Location and strand information: 504404 - 505420 (+)
Family: 2.A.21.9.2
Protein type: TC
Protein description: Adaptive-response sensory-kinase SasA

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001560_00403	hypothetical protein	CAZyme	485230	489138	-	GH78\| CBM67
MGYG000001560_00404	HTH-type transcriptional activator RhaS	TF	489502	491703	+	HTH_AraC+HTH_AraC
MGYG000001560_00405	hypothetical protein	CAZyme	491996	497260	+	GH78\| CBM67
MGYG000001560_00406	Multidrug export protein MepA	TC	498323	499681	-	2.A.66.1.32
MGYG000001560_00407	hypothetical protein	TF	499800	500327	+	PadR
MGYG000001560_00408	putative ABC transporter ATP-binding protein	TC	500416	501102	+	3.A.1.122.14
MGYG000001560_00409	hypothetical protein	null	501092	503653	+	FtsX\| FtsX
MGYG000001560_00410	Transcriptional regulatory protein CseB	TF	503721	504401	+	Trans_reg_C
MGYG000001560_00411	Adaptive-response sensory-kinase SasA	TC	504404	505420	+	2.A.21.9.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature