dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001571_50|CGC1
Gene ID: MGYG000001571_04002
Location and strand information: 1535 - 2464 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000001571_50|CGC1
Gene ID: MGYG000001571_04003
Location and strand information: 2464 - 3303 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001571_50|CGC1
Gene ID: MGYG000001571_04004
Location and strand information: 3361 - 4719 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Putative ABC transporter substrate-binding protein YesO

Gene clsuter ID: MGYG000001571_50|CGC1
Gene ID: MGYG000001571_04005
Location and strand information: 4810 - 6555 (+)
Family: GH154
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.2682
Protein molecular weight: 65983.02
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001571_50|CGC1
Gene ID: MGYG000001571_04006
Location and strand information: 6539 - 7672 (+)
Family: GH88
Protein type: CAZyme
Protein description: Unsaturated glucuronyl hydrolase
Protein isoelectric point: 5.4801
Protein molecular weight: 43433.15
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001571_50|CGC1
Gene ID: MGYG000001571_04007
Location and strand information: 7735 - 8847 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YesR
Protein isoelectric point: 5.4557
Protein molecular weight: 42181.32
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001571_50|CGC1
Gene ID: MGYG000001571_04008
Location and strand information: 9351 - 10085 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001571_50|CGC1
Gene ID: MGYG000001571_04009
Location and strand information: 10377 - 12395 (-)
Family: 2.A.72.1.3
Protein type: TC
Protein description: Low affinity potassium transport system protein kup

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001571_04002	Lactose transport system permease protein LacF	TC	1535	2464	+	3.A.1.1.11
MGYG000001571_04003	L-arabinose transport system permease protein AraQ	TC	2464	3303	+	3.A.1.1.11
MGYG000001571_04004	Putative ABC transporter substrate-binding protein YesO	TC	3361	4719	+	3.A.1.1.11
MGYG000001571_04005	hypothetical protein	CAZyme	4810	6555	+	GH154
MGYG000001571_04006	Unsaturated glucuronyl hydrolase	CAZyme	6539	7672	+	GH88
MGYG000001571_04007	Unsaturated rhamnogalacturonyl hydrolase YesR	CAZyme	7735	8847	+	GH105
MGYG000001571_04008	hypothetical protein	null	9351	10085	+	No domain
MGYG000001571_04009	Low affinity potassium transport system protein kup	TC	10377	12395	-	2.A.72.1.3
Protein ID	Protein Name	Type	Start	End	Strand	Signature