dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001720_39|CGC1
Gene ID: MGYG000001720_01983
Location and strand information: 3300 - 4772 (-)
Family: 3.D.1.2.1
Protein type: TC
Protein description: NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic

Gene clsuter ID: MGYG000001720_39|CGC1
Gene ID: MGYG000001720_01984
Location and strand information: 4797 - 6320 (-)
Family: 3.D.1.5.1
Protein type: TC
Protein description: NAD(P)H-quinone oxidoreductase chain 4 1

Gene clsuter ID: MGYG000001720_39|CGC1
Gene ID: MGYG000001720_01985
Location and strand information: 6357 - 8318 (-)
Family: 3.D.9.1.1
Protein type: TC
Protein description: NADH-quinone oxidoreductase subunit L

Gene clsuter ID: MGYG000001720_39|CGC1
Gene ID: MGYG000001720_01986
Location and strand information: 8326 - 8634 (-)
Family: 3.D.9.1.1
Protein type: TC
Protein description: NADH-quinone oxidoreductase subunit K

Gene clsuter ID: MGYG000001720_39|CGC1
Gene ID: MGYG000001720_01987
Location and strand information: 8631 - 9152 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001720_39|CGC1
Gene ID: MGYG000001720_01988
Location and strand information: 9158 - 9727 (-)
Family: Fer4+Fer4
Protein type: STP
Protein description: NADH-quinone oxidoreductase subunit I

Gene clsuter ID: MGYG000001720_39|CGC1
Gene ID: MGYG000001720_01989
Location and strand information: 9741 - 10826 (-)
Family: 3.D.1.5.1
Protein type: TC
Protein description: NADH-quinone oxidoreductase subunit H

Gene clsuter ID: MGYG000001720_39|CGC1
Gene ID: MGYG000001720_01990
Location and strand information: 10950 - 12527 (-)
Family: 3.D.1.5.1
Protein type: TC
Protein description: NADH-quinone oxidoreductase subunit C/D

Gene clsuter ID: MGYG000001720_39|CGC1
Gene ID: MGYG000001720_01991
Location and strand information: 12543 - 13358 (-)
Family: 3.D.1.6.1
Protein type: TC
Protein description: NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

Gene clsuter ID: MGYG000001720_39|CGC1
Gene ID: MGYG000001720_01992
Location and strand information: 13349 - 13699 (-)
Family: 3.D.1.8.1
Protein type: TC
Protein description: NAD(P)H-quinone oxidoreductase subunit 3

Gene clsuter ID: MGYG000001720_39|CGC1
Gene ID: MGYG000001720_01993
Location and strand information: 14448 - 14633 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001720_39|CGC1
Gene ID: MGYG000001720_01994
Location and strand information: 14789 - 18865 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001720_39|CGC1
Gene ID: MGYG000001720_01995
Location and strand information: 19057 - 22362 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001720_39|CGC1
Gene ID: MGYG000001720_01996
Location and strand information: 22374 - 24368 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001720_39|CGC1
Gene ID: MGYG000001720_01997
Location and strand information: 24607 - 25734 (+)
Family: GH43|GH16|GH43_24
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.0427
Protein molecular weight: 42356.08
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001720_39|CGC1
Gene ID: MGYG000001720_01998
Location and strand information: 25863 - 26027 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001720_39|CGC1
Gene ID: MGYG000001720_01999
Location and strand information: 26171 - 28630 (-)
Family: GH31
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.5506
Protein molecular weight: 94062.99
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001720_39|CGC1
Gene ID: MGYG000001720_02000
Location and strand information: 29057 - 30055 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001720_39|CGC1
Gene ID: MGYG000001720_02001
Location and strand information: 30135 - 31889 (-)
Family: 8.A.46.2.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001720_39|CGC1
Gene ID: MGYG000001720_02002
Location and strand information: 31939 - 35118 (-)
Family: 1.B.14.6.2
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinoxylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001720_01983	NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic	TC	3300	4772	-	3.D.1.2.1
MGYG000001720_01984	NAD(P)H-quinone oxidoreductase chain 4 1	TC	4797	6320	-	3.D.1.5.1
MGYG000001720_01985	NADH-quinone oxidoreductase subunit L	TC	6357	8318	-	3.D.9.1.1
MGYG000001720_01986	NADH-quinone oxidoreductase subunit K	TC	8326	8634	-	3.D.9.1.1
MGYG000001720_01987	hypothetical protein	null	8631	9152	-	Oxidored_q3
MGYG000001720_01988	NADH-quinone oxidoreductase subunit I	STP	9158	9727	-	Fer4\| Fer4
MGYG000001720_01989	NADH-quinone oxidoreductase subunit H	TC	9741	10826	-	3.D.1.5.1
MGYG000001720_01990	NADH-quinone oxidoreductase subunit C/D	TC	10950	12527	-	3.D.1.5.1
MGYG000001720_01991	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic	TC	12543	13358	-	3.D.1.6.1
MGYG000001720_01992	NAD(P)H-quinone oxidoreductase subunit 3	TC	13349	13699	-	3.D.1.8.1
MGYG000001720_01993	hypothetical protein	null	14448	14633	+	No domain
MGYG000001720_01994	Sensor histidine kinase RcsC	TF	14789	18865	-	HTH_AraC
MGYG000001720_01995	TonB-dependent receptor SusC	TC	19057	22362	+	1.B.14.6.1
MGYG000001720_01996	hypothetical protein	null	22374	24368	+	SusD-like_3\| SusD_RagB
MGYG000001720_01997	hypothetical protein	CAZyme	24607	25734	+	GH43\| GH16\| GH43_24
MGYG000001720_01998	hypothetical protein	null	25863	26027	+	No domain
MGYG000001720_01999	hypothetical protein	CAZyme	26171	28630	-	GH31
MGYG000001720_02000	hypothetical protein	null	29057	30055	-	No domain
MGYG000001720_02001	hypothetical protein	TC	30135	31889	-	8.A.46.2.2
MGYG000001720_02002	hypothetical protein	TC	31939	35118	-	1.B.14.6.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature