dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002093_10|CGC1
Gene ID: MGYG000002093_00164
Location and strand information: 17 - 898 (+)
Family: 3.A.1.1.39
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000002093_10|CGC1
Gene ID: MGYG000002093_00165
Location and strand information: 912 - 3026 (+)
Family: TPR_2
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002093_10|CGC1
Gene ID: MGYG000002093_00166
Location and strand information: 3048 - 5276 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002093_10|CGC1
Gene ID: MGYG000002093_00167
Location and strand information: 5276 - 6193 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002093_10|CGC1
Gene ID: MGYG000002093_00168
Location and strand information: 6204 - 7169 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002093_10|CGC1
Gene ID: MGYG000002093_00169
Location and strand information: 7209 - 9290 (+)
Family: GH36
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.154
Protein molecular weight: 77190.25
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002093_10|CGC1
Gene ID: MGYG000002093_00170
Location and strand information: 9322 - 11532 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002093_10|CGC1
Gene ID: MGYG000002093_00171
Location and strand information: 11572 - 12549 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000002093_10|CGC1
Gene ID: MGYG000002093_00172
Location and strand information: 12613 - 14856 (-)
Family: GH3
Protein type: CAZyme
Protein description: Beta-glucosidase BoGH3B
Protein isoelectric point: 4.8264
Protein molecular weight: 80681.43
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinoxylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002093_00164	L-arabinose transport system permease protein AraQ	TC	17	898	+	3.A.1.1.39
MGYG000002093_00165	hypothetical protein	STP	912	3026	+	TPR_2
MGYG000002093_00166	hypothetical protein	null	3048	5276	+	DUF5696
MGYG000002093_00167	hypothetical protein	TC	5276	6193	+	3.A.1.1.11
MGYG000002093_00168	hypothetical protein	TC	6204	7169	+	3.A.1.1.11
MGYG000002093_00169	hypothetical protein	CAZyme	7209	9290	+	GH36
MGYG000002093_00170	hypothetical protein	null	9322	11532	+	No domain
MGYG000002093_00171	HTH-type transcriptional activator RhaS	TF	11572	12549	+	HTH_AraC+HTH_AraC
MGYG000002093_00172	Beta-glucosidase BoGH3B	CAZyme	12613	14856	-	GH3
Protein ID	Protein Name	Type	Start	End	Strand	Signature