dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002131_24|CGC1
Gene ID: MGYG000002131_00627
Location and strand information: 1559 - 3523 (-)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8803
Protein molecular weight: 73336.49
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002131_24|CGC1
Gene ID: MGYG000002131_00628
Location and strand information: 3808 - 4731 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000002131_24|CGC1
Gene ID: MGYG000002131_00629
Location and strand information: 5066 - 6025 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000002131_24|CGC1
Gene ID: MGYG000002131_00630
Location and strand information: 6039 - 6965 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002131_24|CGC1
Gene ID: MGYG000002131_00631
Location and strand information: 7074 - 8819 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002131_24|CGC1
Gene ID: MGYG000002131_00632
Location and strand information: 8983 - 10035 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YesR
Protein isoelectric point: 4.9115
Protein molecular weight: 39483.17
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002131_24|CGC1
Gene ID: MGYG000002131_00633
Location and strand information: 10064 - 12211 (+)
Family: GH112
Protein type: CAZyme
Protein description: D-galactosyl-beta-1->4-L-rhamnose phosphorylase
Protein isoelectric point: 4.8394
Protein molecular weight: 81020.25
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002131_24|CGC1
Gene ID: MGYG000002131_00634
Location and strand information: 12359 - 12787 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002131_24|CGC1
Gene ID: MGYG000002131_00635
Location and strand information: 12845 - 14197 (+)
Family: 3.A.24.3.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002131_24|CGC1
Gene ID: MGYG000002131_00636
Location and strand information: 14335 - 15513 (+)
Family: null
Protein type: null
Protein description: Trigger factor

Gene clsuter ID: MGYG000002131_24|CGC1
Gene ID: MGYG000002131_00637
Location and strand information: 15654 - 17123 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002131_24|CGC1
Gene ID: MGYG000002131_00638
Location and strand information: 17143 - 18300 (+)
Family: 2.A.4.7.4
Protein type: TC
Protein description: Ferrous-iron efflux pump FieF

Gene clsuter ID: MGYG000002131_24|CGC1
Gene ID: MGYG000002131_00639
Location and strand information: 18453 - 18821 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002131_24|CGC1
Gene ID: MGYG000002131_00640
Location and strand information: 18901 - 19068 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002131_24|CGC1
Gene ID: MGYG000002131_00641
Location and strand information: 19160 - 20272 (-)
Family: 2.A.45.2.6
Protein type: TC
Protein description: Inner membrane protein YbiR

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002131_00627	hypothetical protein	CAZyme	1559	3523	-	CE12
MGYG000002131_00628	HTH-type transcriptional activator RhaS	TF	3808	4731	-	HTH_AraC+HTH_AraC
MGYG000002131_00629	putative multiple-sugar transport system permease YteP	TC	5066	6025	+	3.A.1.1.10
MGYG000002131_00630	hypothetical protein	TC	6039	6965	+	3.A.1.1.29
MGYG000002131_00631	hypothetical protein	null	7074	8819	+	No domain
MGYG000002131_00632	Unsaturated rhamnogalacturonyl hydrolase YesR	CAZyme	8983	10035	+	GH105
MGYG000002131_00633	D-galactosyl-beta-1->4-L-rhamnose phosphorylase	CAZyme	10064	12211	+	GH112
MGYG000002131_00634	hypothetical protein	null	12359	12787	+	HIT
MGYG000002131_00635	hypothetical protein	TC	12845	14197	+	3.A.24.3.1
MGYG000002131_00636	Trigger factor	null	14335	15513	+	FKBP_C\| Trigger_C
MGYG000002131_00637	hypothetical protein	null	15654	17123	+	No domain
MGYG000002131_00638	Ferrous-iron efflux pump FieF	TC	17143	18300	+	2.A.4.7.4
MGYG000002131_00639	hypothetical protein	null	18453	18821	+	No domain
MGYG000002131_00640	hypothetical protein	null	18901	19068	+	No domain
MGYG000002131_00641	Inner membrane protein YbiR	TC	19160	20272	-	2.A.45.2.6
Protein ID	Protein Name	Type	Start	End	Strand	Signature