dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002190_13|CGC1
Gene ID: MGYG000002190_01486
Location and strand information: 3748 - 4470 (-)
Family: CE4
Protein type: CAZyme
Protein description: Peptidoglycan-N-acetylglucosamine deacetylase
Protein isoelectric point: 7.0044
Protein molecular weight: 27555.29
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002190_13|CGC1
Gene ID: MGYG000002190_01487
Location and strand information: 4797 - 5810 (+)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional regulator LacR

Gene clsuter ID: MGYG000002190_13|CGC1
Gene ID: MGYG000002190_01488
Location and strand information: 5939 - 6913 (+)
Family: null
Protein type: null
Protein description: Lysophospholipase L2

Gene clsuter ID: MGYG000002190_13|CGC1
Gene ID: MGYG000002190_01489
Location and strand information: 7001 - 9067 (+)
Family: GH36
Protein type: CAZyme
Protein description: Alpha-galactosidase AgaA
Protein isoelectric point: 5.535
Protein molecular weight: 79935.64
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002190_13|CGC1
Gene ID: MGYG000002190_01490
Location and strand information: 9261 - 10631 (+)
Family: 2.A.2.1.1
Protein type: TC
Protein description: Melibiose carrier protein

Gene clsuter ID: MGYG000002190_13|CGC1
Gene ID: MGYG000002190_01491
Location and strand information: 10763 - 12715 (+)
Family: GH42
Protein type: CAZyme
Protein description: Beta-galactosidase BgaA
Protein isoelectric point: 4.9187
Protein molecular weight: 75850.66
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002190_13|CGC1
Gene ID: MGYG000002190_01492
Location and strand information: 12770 - 13792 (-)
Family: LacI
Protein type: TF
Protein description: Catabolite control protein A

Gene clsuter ID: MGYG000002190_13|CGC1
Gene ID: MGYG000002190_01493
Location and strand information: 13866 - 15041 (-)
Family: null
Protein type: null
Protein description: Galactokinase

Gene clsuter ID: MGYG000002190_13|CGC1
Gene ID: MGYG000002190_01494
Location and strand information: 15473 - 16576 (+)
Family: 3.A.1.1.22
Protein type: TC
Protein description: sn-glycerol-3-phosphate import ATP-binding protein UgpC

Gene clsuter ID: MGYG000002190_13|CGC1
Gene ID: MGYG000002190_01495
Location and strand information: 16612 - 17580 (+)
Family: HTH_8
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002190_13|CGC1
Gene ID: MGYG000002190_01496
Location and strand information: 17707 - 17916 (+)
Family: LacI
Protein type: TF
Protein description: putative HTH-type transcriptional repressor ExuR

Gene clsuter ID: MGYG000002190_13|CGC1
Gene ID: MGYG000002190_01497
Location and strand information: 18164 - 19663 (+)
Family: GH77
Protein type: CAZyme
Protein description: 4-alpha-glucanotransferase
Protein isoelectric point: 5.0674
Protein molecular weight: 58158.23
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002190_13|CGC1
Gene ID: MGYG000002190_01498
Location and strand information: 19666 - 22026 (+)
Family: GT35
Protein type: CAZyme
Protein description: Glycogen phosphorylase
Protein isoelectric point: 4.86
Protein molecular weight: 90925.43
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002190_13|CGC1
Gene ID: MGYG000002190_01499
Location and strand information: 22185 - 22961 (+)
Family: 1.A.1.17.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002190_13|CGC1
Gene ID: MGYG000002190_01500
Location and strand information: 23027 - 23995 (+)
Family: null
Protein type: null
Protein description: Putative 2-hydroxyacid dehydrogenase

Gene clsuter ID: MGYG000002190_13|CGC1
Gene ID: MGYG000002190_01501
Location and strand information: 24115 - 25782 (+)
Family: null
Protein type: null
Protein description: 2-isopropylmalate synthase

Gene clsuter ID: MGYG000002190_13|CGC1
Gene ID: MGYG000002190_01502
Location and strand information: 26105 - 27481 (+)
Family: 2.A.25.1.4
Protein type: TC
Protein description: Amino-acid carrier protein AlsT

Gene clsuter ID: MGYG000002190_13|CGC1
Gene ID: MGYG000002190_01503
Location and strand information: 27628 - 28590 (+)
Family: GH73
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.2718
Protein molecular weight: 37032.93
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002190_13|CGC1
Gene ID: MGYG000002190_01504
Location and strand information: 28628 - 28897 (-)
Family: null
Protein type: null
Protein description: Acylphosphatase

Gene clsuter ID: MGYG000002190_13|CGC1
Gene ID: MGYG000002190_01505
Location and strand information: 28911 - 29969 (-)
Family: 3.A.1.11.7
Protein type: TC
Protein description: Spermidine/putrescine-binding periplasmic protein

Gene clsuter ID: MGYG000002190_13|CGC1
Gene ID: MGYG000002190_01506
Location and strand information: 29970 - 30773 (-)
Family: 3.A.1.11.8
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002190_13|CGC1
Gene ID: MGYG000002190_01507
Location and strand information: 30774 - 31613 (-)
Family: 3.A.1.11.1
Protein type: TC
Protein description: Spermidine/putrescine transport system permease protein PotB

Gene clsuter ID: MGYG000002190_13|CGC1
Gene ID: MGYG000002190_01508
Location and strand information: 31615 - 32658 (-)
Family: 3.A.1.11.8
Protein type: TC
Protein description: Spermidine/putrescine import ATP-binding protein PotA

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is starch download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002190_01486	Peptidoglycan-N-acetylglucosamine deacetylase	CAZyme	3748	4470	-	CE4
MGYG000002190_01487	HTH-type transcriptional regulator LacR	TF	4797	5810	+	LacI
MGYG000002190_01488	Lysophospholipase L2	null	5939	6913	+	Hydrolase_4
MGYG000002190_01489	Alpha-galactosidase AgaA	CAZyme	7001	9067	+	GH36
MGYG000002190_01490	Melibiose carrier protein	TC	9261	10631	+	2.A.2.1.1
MGYG000002190_01491	Beta-galactosidase BgaA	CAZyme	10763	12715	+	GH42
MGYG000002190_01492	Catabolite control protein A	TF	12770	13792	-	LacI
MGYG000002190_01493	Galactokinase	null	13866	15041	-	GalKase_gal_bdg\| GHMP_kinases_N\| GHMP_kinases_C
MGYG000002190_01494	sn-glycerol-3-phosphate import ATP-binding protein UgpC	TC	15473	16576	+	3.A.1.1.22
MGYG000002190_01495	hypothetical protein	TF	16612	17580	+	HTH_8
MGYG000002190_01496	putative HTH-type transcriptional repressor ExuR	TF	17707	17916	+	LacI
MGYG000002190_01497	4-alpha-glucanotransferase	CAZyme	18164	19663	+	GH77
MGYG000002190_01498	Glycogen phosphorylase	CAZyme	19666	22026	+	GT35
MGYG000002190_01499	hypothetical protein	TC	22185	22961	+	1.A.1.17.2
MGYG000002190_01500	Putative 2-hydroxyacid dehydrogenase	null	23027	23995	+	2-Hacid_dh\| 2-Hacid_dh_C
MGYG000002190_01501	2-isopropylmalate synthase	null	24115	25782	+	HMGL-like\| LeuA_dimer
MGYG000002190_01502	Amino-acid carrier protein AlsT	TC	26105	27481	+	2.A.25.1.4
MGYG000002190_01503	hypothetical protein	CAZyme	27628	28590	+	GH73
MGYG000002190_01504	Acylphosphatase	null	28628	28897	-	Acylphosphatase
MGYG000002190_01505	Spermidine/putrescine-binding periplasmic protein	TC	28911	29969	-	3.A.1.11.7
MGYG000002190_01506	hypothetical protein	TC	29970	30773	-	3.A.1.11.8
MGYG000002190_01507	Spermidine/putrescine transport system permease protein PotB	TC	30774	31613	-	3.A.1.11.1
MGYG000002190_01508	Spermidine/putrescine import ATP-binding protein PotA	TC	31615	32658	-	3.A.1.11.8
Protein ID	Protein Name	Type	Start	End	Strand	Signature