dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002281_1|CGC8
Gene ID: MGYG000002281_00319
Location and strand information: 452785 - 456051 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002281_1|CGC8
Gene ID: MGYG000002281_00320
Location and strand information: 456064 - 457650 (+)
Family: 8.A.46.1.4
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002281_1|CGC8
Gene ID: MGYG000002281_00321
Location and strand information: 457686 - 459404 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002281_1|CGC8
Gene ID: MGYG000002281_00322
Location and strand information: 459410 - 461155 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002281_1|CGC8
Gene ID: MGYG000002281_00323
Location and strand information: 461172 - 464324 (+)
Family: 1.B.14.6.2
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002281_1|CGC8
Gene ID: MGYG000002281_00324
Location and strand information: 464330 - 466081 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002281_1|CGC8
Gene ID: MGYG000002281_00325
Location and strand information: 466113 - 467720 (+)
Family: PL9_1|PL9
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.9693
Protein molecular weight: 58166.14
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002281_1|CGC8
Gene ID: MGYG000002281_00326
Location and strand information: 467742 - 468395 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002281_1|CGC8
Gene ID: MGYG000002281_00327
Location and strand information: 468647 - 471967 (+)
Family: PL26
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.162
Protein molecular weight: 126099.28
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002281_1|CGC8
Gene ID: MGYG000002281_00328
Location and strand information: 472097 - 473641 (-)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.8052
Protein molecular weight: 57320.63
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002281_1|CGC8
Gene ID: MGYG000002281_00329
Location and strand information: 473752 - 474891 (-)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 6.925
Protein molecular weight: 43789.79
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002281_1|CGC8
Gene ID: MGYG000002281_00330
Location and strand information: 474937 - 475086 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002281_1|CGC8
Gene ID: MGYG000002281_00331
Location and strand information: 475140 - 476999 (+)
Family: CBM35|PL11_1|PL11|CBM2
Protein type: CAZyme
Protein description: Rhamnogalacturonan endolyase YesW
Protein isoelectric point: 5.5181
Protein molecular weight: 68880.04
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002281_1|CGC8
Gene ID: MGYG000002281_00332
Location and strand information: 477003 - 478412 (+)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.2885
Protein molecular weight: 53002.21
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002281_1|CGC8
Gene ID: MGYG000002281_00333
Location and strand information: 478431 - 478745 (+)
Family: null
Protein type: null
Protein description: L-rhamnose mutarotase

Gene clsuter ID: MGYG000002281_1|CGC8
Gene ID: MGYG000002281_00334
Location and strand information: 478889 - 483193 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002281_1|CGC8
Gene ID: MGYG000002281_00335
Location and strand information: 483400 - 485070 (+)
Family: CE12|CE6
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.7547
Protein molecular weight: 62510.02
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002281_1|CGC8
Gene ID: MGYG000002281_00336
Location and strand information: 485081 - 486361 (+)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.7962
Protein molecular weight: 47865.3
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002281_1|CGC8
Gene ID: MGYG000002281_00337
Location and strand information: 486504 - 489473 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 7.268
Protein molecular weight: 112781.04
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002281_1|CGC8
Gene ID: MGYG000002281_00338
Location and strand information: 489561 - 493859 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002281_1|CGC8
Gene ID: MGYG000002281_00339
Location and strand information: 494444 - 495094 (-)
Family: null
Protein type: null
Protein description: Phosphoglycolate phosphatase

Gene clsuter ID: MGYG000002281_1|CGC8
Gene ID: MGYG000002281_00340
Location and strand information: 495296 - 496972 (-)
Family: GH43_10|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.8962
Protein molecular weight: 62651.01
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002281_1|CGC8
Gene ID: MGYG000002281_00341
Location and strand information: 497138 - 498370 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002281_1|CGC8
Gene ID: MGYG000002281_00342
Location and strand information: 498674 - 500281 (-)
Family: GH28
Protein type: CAZyme
Protein description: Exo-poly-alpha-D-galacturonosidase
Protein isoelectric point: 4.9501
Protein molecular weight: 58958.24
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002281_00325	PL9_e26\|4.2.2.23	pectin
MGYG000002281_00327	PL26_e0
MGYG000002281_00328	CE12_e40
MGYG000002281_00329	GH105_e14\|3.2.1.172	pectin
MGYG000002281_00331	PL11_e0\|CBM35_e56\|CBM2_e72\|4.2.2.23	pectin
MGYG000002281_00332	GH105_e35\|3.2.1.172	pectin
MGYG000002281_00335	CE6_e5
MGYG000002281_00336	CE12_e46
MGYG000002281_00337	GH2_e11\|3.2.1.31	beta-glucuronan
MGYG000002281_00340	GH43_e184\|3.2.1.55	xylan
MGYG000002281_00342	GH28_e61

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002281_00319	TonB-dependent receptor SusC	TC	452785	456051	+	1.B.14.6.1
MGYG000002281_00320	hypothetical protein	TC	456064	457650	+	8.A.46.1.4
MGYG000002281_00321	hypothetical protein	null	457686	459404	+	Fasciclin\| DUF5108
MGYG000002281_00322	hypothetical protein	null	459410	461155	+	No domain
MGYG000002281_00323	TonB-dependent receptor SusC	TC	461172	464324	+	1.B.14.6.2
MGYG000002281_00324	hypothetical protein	null	464330	466081	+	No domain
MGYG000002281_00325	hypothetical protein	CAZyme	466113	467720	+	PL9_1\| PL9
MGYG000002281_00326	hypothetical protein	null	467742	468395	+	No domain
MGYG000002281_00327	hypothetical protein	CAZyme	468647	471967	+	PL26
MGYG000002281_00328	hypothetical protein	CAZyme	472097	473641	-	CE12
MGYG000002281_00329	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	473752	474891	-	GH105
MGYG000002281_00330	hypothetical protein	null	474937	475086	-	No domain
MGYG000002281_00331	Rhamnogalacturonan endolyase YesW	CAZyme	475140	476999	+	CBM35\| PL11_1\| PL11\| CBM2
MGYG000002281_00332	hypothetical protein	CAZyme	477003	478412	+	GH105
MGYG000002281_00333	L-rhamnose mutarotase	null	478431	478745	+	rhaM
MGYG000002281_00334	Sensor histidine kinase RcsC	TF	478889	483193	+	HTH_AraC+HTH_AraC
MGYG000002281_00335	hypothetical protein	CAZyme	483400	485070	+	CE12\| CE6
MGYG000002281_00336	hypothetical protein	CAZyme	485081	486361	+	CE12
MGYG000002281_00337	Beta-galactosidase	CAZyme	486504	489473	-	GH2
MGYG000002281_00338	Sensor histidine kinase RcsC	TF	489561	493859	-	HTH_AraC
MGYG000002281_00339	Phosphoglycolate phosphatase	null	494444	495094	-	HAD_2
MGYG000002281_00340	hypothetical protein	CAZyme	495296	496972	-	GH43_10\| GH43
MGYG000002281_00341	hypothetical protein	null	497138	498370	-	DUF4861
MGYG000002281_00342	Exo-poly-alpha-D-galacturonosidase	CAZyme	498674	500281	-	GH28
Protein ID	Protein Name	Type	Start	End	Strand	Signature