dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002281_4|CGC1
Gene ID: MGYG000002281_01250
Location and strand information: 95645 - 98806 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002281_4|CGC1
Gene ID: MGYG000002281_01251
Location and strand information: 98902 - 99006 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002281_4|CGC1
Gene ID: MGYG000002281_01252
Location and strand information: 99024 - 101450 (-)
Family: GH95
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.3261
Protein molecular weight: 90847.42
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002281_4|CGC1
Gene ID: MGYG000002281_01253
Location and strand information: 101618 - 105661 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002281_4|CGC1
Gene ID: MGYG000002281_01254
Location and strand information: 105839 - 107860 (+)
Family: GH36
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.5742
Protein molecular weight: 76065.58
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002281_4|CGC1
Gene ID: MGYG000002281_01255
Location and strand information: 107869 - 109815 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002281_4|CGC1
Gene ID: MGYG000002281_01256
Location and strand information: 109840 - 111996 (+)
Family: GH36
Protein type: CAZyme
Protein description: Alpha-galactosidase AgaA
Protein isoelectric point: 6.4315
Protein molecular weight: 82638.8
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002281_4|CGC1
Gene ID: MGYG000002281_01257
Location and strand information: 112043 - 114250 (+)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4733
Protein molecular weight: 83339.38
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002281_4|CGC1
Gene ID: MGYG000002281_01258
Location and strand information: 114301 - 116571 (+)
Family: GH3
Protein type: CAZyme
Protein description: Beta-glucosidase BoGH3B
Protein isoelectric point: 6.1349
Protein molecular weight: 83969.91
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002281_4|CGC1
Gene ID: MGYG000002281_01259
Location and strand information: 116581 - 118026 (+)
Family: GH30_2|GH30
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.6321
Protein molecular weight: 54862.71
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002281_4|CGC1
Gene ID: MGYG000002281_01260
Location and strand information: 118166 - 119008 (-)
Family: 1.A.30.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002281_4|CGC1
Gene ID: MGYG000002281_01261
Location and strand information: 119170 - 119751 (-)
Family: null
Protein type: null
Protein description: dITP/XTP pyrophosphatase

Gene clsuter ID: MGYG000002281_4|CGC1
Gene ID: MGYG000002281_01262
Location and strand information: 119798 - 120715 (-)
Family: 2.A.115.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002281_4|CGC1
Gene ID: MGYG000002281_01263
Location and strand information: 120862 - 123696 (-)
Family: null
Protein type: null
Protein description: Leucine--tRNA ligase

Gene clsuter ID: MGYG000002281_4|CGC1
Gene ID: MGYG000002281_01264
Location and strand information: 124625 - 126373 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002281_4|CGC1
Gene ID: MGYG000002281_01265
Location and strand information: 126395 - 128329 (+)
Family: PL17
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.8841
Protein molecular weight: 73358.84
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002281_4|CGC1
Gene ID: MGYG000002281_01266
Location and strand information: 128361 - 129800 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002281_4|CGC1
Gene ID: MGYG000002281_01267
Location and strand information: 129883 - 130758 (+)
Family: null
Protein type: null
Protein description: putative amino-acid metabolite efflux pump

Gene clsuter ID: MGYG000002281_4|CGC1
Gene ID: MGYG000002281_01268
Location and strand information: 130913 - 133261 (-)
Family: GH115
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.4069
Protein molecular weight: 90283.94
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002281_4|CGC1
Gene ID: MGYG000002281_01269
Location and strand information: 133290 - 135746 (-)
Family: GH2|GH43_24
Protein type: CAZyme
Protein description: Beta-galactosidase BoGH2A
Protein isoelectric point: 8.8066
Protein molecular weight: 93399.14
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002281_4|CGC1
Gene ID: MGYG000002281_01270
Location and strand information: 135878 - 136747 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000002281_4|CGC1
Gene ID: MGYG000002281_01271
Location and strand information: 137081 - 139699 (+)
Family: null
Protein type: null
Protein description: DNA mismatch repair protein MutS

Gene clsuter ID: MGYG000002281_4|CGC1
Gene ID: MGYG000002281_01272
Location and strand information: 139752 - 141833 (-)
Family: CBM32
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.6996
Protein molecular weight: 79116.37
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002281_01252	GH95_e3
MGYG000002281_01254	GH36_e44
MGYG000002281_01256	GH36_e5\|3.2.1.22	alpha-galactan
MGYG000002281_01257	GH92_e34\|3.2.1.24\|3.2.1.-	hostglycan
MGYG000002281_01258	GH3_e41\|3.2.1.55\|3.2.1.37\|3.2.1.21	xylan\|beta-glucan\|arabinan
MGYG000002281_01259	GH30_e41\|3.2.1.37	xylan
MGYG000002281_01265	PL17_e5
MGYG000002281_01268	GH115_e1\|3.2.1.-	arabinogalactan
MGYG000002281_01269	GH2_e48
MGYG000002281_01272

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is xylan

Substrate predicted by dbCAN-PUL is xylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002281_01250	TonB-dependent receptor SusC	TC	95645	98806	-	1.B.14.6.1
MGYG000002281_01251	hypothetical protein	null	98902	99006	-	No domain
MGYG000002281_01252	hypothetical protein	CAZyme	99024	101450	-	GH95
MGYG000002281_01253	Sensor histidine kinase RcsC	TF	101618	105661	+	HTH_AraC
MGYG000002281_01254	hypothetical protein	CAZyme	105839	107860	+	GH36
MGYG000002281_01255	hypothetical protein	null	107869	109815	+	SASA\| SASA
MGYG000002281_01256	Alpha-galactosidase AgaA	CAZyme	109840	111996	+	GH36
MGYG000002281_01257	hypothetical protein	CAZyme	112043	114250	+	GH92
MGYG000002281_01258	Beta-glucosidase BoGH3B	CAZyme	114301	116571	+	GH3
MGYG000002281_01259	hypothetical protein	CAZyme	116581	118026	+	GH30_2\| GH30
MGYG000002281_01260	hypothetical protein	TC	118166	119008	-	1.A.30.1.3
MGYG000002281_01261	dITP/XTP pyrophosphatase	null	119170	119751	-	Ham1p_like
MGYG000002281_01262	hypothetical protein	TC	119798	120715	-	2.A.115.1.1
MGYG000002281_01263	Leucine--tRNA ligase	null	120862	123696	-	tRNA-synt_1g\| tRNA-synt_1_2\| Anticodon_1
MGYG000002281_01264	hypothetical protein	null	124625	126373	+	No domain
MGYG000002281_01265	hypothetical protein	CAZyme	126395	128329	+	PL17
MGYG000002281_01266	hypothetical protein	null	128361	129800	+	SASA
MGYG000002281_01267	putative amino-acid metabolite efflux pump	null	129883	130758	+	EamA\| EamA
MGYG000002281_01268	hypothetical protein	CAZyme	130913	133261	-	GH115
MGYG000002281_01269	Beta-galactosidase BoGH2A	CAZyme	133290	135746	-	GH2\| GH43_24
MGYG000002281_01270	HTH-type transcriptional activator RhaR	TF	135878	136747	+	HTH_AraC+HTH_AraC
MGYG000002281_01271	DNA mismatch repair protein MutS	null	137081	139699	+	MutS_I\| MutS_II\| MutS_III\| MutS_IV\| MutS_V
MGYG000002281_01272	hypothetical protein	CAZyme	139752	141833	-	CBM32
Protein ID	Protein Name	Type	Start	End	Strand	Signature