dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002390_12|CGC1
Gene ID: MGYG000002390_00416
Location and strand information: 40320 - 41030 (-)
Family: 3.A.1.4.10
Protein type: TC
Protein description: High-affinity branched-chain amino acid transport ATP-binding protein LivF

Gene clsuter ID: MGYG000002390_12|CGC1
Gene ID: MGYG000002390_00417
Location and strand information: 41032 - 41814 (-)
Family: 3.A.1.4.10
Protein type: TC
Protein description: Lipopolysaccharide export system ATP-binding protein LptB

Gene clsuter ID: MGYG000002390_12|CGC1
Gene ID: MGYG000002390_00418
Location and strand information: 41807 - 42769 (-)
Family: 3.A.1.4.10
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002390_12|CGC1
Gene ID: MGYG000002390_00419
Location and strand information: 42780 - 43658 (-)
Family: 3.A.1.4.10
Protein type: TC
Protein description: High-affinity branched-chain amino acid transport system permease protein LivH

Gene clsuter ID: MGYG000002390_12|CGC1
Gene ID: MGYG000002390_00420
Location and strand information: 43678 - 44877 (-)
Family: 3.A.1.4.10
Protein type: TC
Protein description: Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein

Gene clsuter ID: MGYG000002390_12|CGC1
Gene ID: MGYG000002390_00421
Location and strand information: 45308 - 45919 (+)
Family: null
Protein type: null
Protein description: putative sugar epimerase YhfK

Gene clsuter ID: MGYG000002390_12|CGC1
Gene ID: MGYG000002390_00422
Location and strand information: 46071 - 47546 (+)
Family: 2.A.3.7.5
Protein type: TC
Protein description: Inner membrane transporter YjeM

Gene clsuter ID: MGYG000002390_12|CGC1
Gene ID: MGYG000002390_00423
Location and strand information: 47592 - 48608 (-)
Family: GT113
Protein type: CAZyme
Protein description: Beta-1,6-galactofuranosyltransferase WbbI
Protein isoelectric point: 8.9664
Protein molecular weight: 38700.61
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002390_12|CGC1
Gene ID: MGYG000002390_00424
Location and strand information: 48732 - 49763 (+)
Family: null
Protein type: null
Protein description: NADPH dehydrogenase

Gene clsuter ID: MGYG000002390_12|CGC1
Gene ID: MGYG000002390_00425
Location and strand information: 49822 - 50535 (-)
Family: 2.A.89.3.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002390_12|CGC1
Gene ID: MGYG000002390_00426
Location and strand information: 50552 - 51223 (-)
Family: 2.A.89.3.2
Protein type: TC
Protein description: hypothetical protein

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002390_00416	High-affinity branched-chain amino acid transport ATP-binding protein LivF	TC	40320	41030	-	3.A.1.4.10
MGYG000002390_00417	Lipopolysaccharide export system ATP-binding protein LptB	TC	41032	41814	-	3.A.1.4.10
MGYG000002390_00418	hypothetical protein	TC	41807	42769	-	3.A.1.4.10
MGYG000002390_00419	High-affinity branched-chain amino acid transport system permease protein LivH	TC	42780	43658	-	3.A.1.4.10
MGYG000002390_00420	Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein	TC	43678	44877	-	3.A.1.4.10
MGYG000002390_00421	putative sugar epimerase YhfK	null	45308	45919	+	NAD_binding_10
MGYG000002390_00422	Inner membrane transporter YjeM	TC	46071	47546	+	2.A.3.7.5
MGYG000002390_00423	Beta-1,6-galactofuranosyltransferase WbbI	CAZyme	47592	48608	-	GT113
MGYG000002390_00424	NADPH dehydrogenase	null	48732	49763	+	Oxidored_FMN
MGYG000002390_00425	hypothetical protein	TC	49822	50535	-	2.A.89.3.2
MGYG000002390_00426	hypothetical protein	TC	50552	51223	-	2.A.89.3.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature