dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002403_69|CGC1
Gene ID: MGYG000002403_02355
Location and strand information: 26379 - 27242 (-)
Family: 3.A.1.149.1
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Gene clsuter ID: MGYG000002403_69|CGC1
Gene ID: MGYG000002403_02356
Location and strand information: 27259 - 27633 (-)
Family: GntR
Protein type: TF
Protein description: HTH-type transcriptional repressor YtrA

Gene clsuter ID: MGYG000002403_69|CGC1
Gene ID: MGYG000002403_02357
Location and strand information: 27928 - 33717 (+)
Family: CE12|PL11_1|PL11|CBM13|CBM2|CBM35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.1819
Protein molecular weight: 209594.35
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002403_69|CGC1
Gene ID: MGYG000002403_02358
Location and strand information: 33729 - 34655 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000002403_69|CGC1
Gene ID: MGYG000002403_02359
Location and strand information: 34985 - 35947 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000002403_69|CGC1
Gene ID: MGYG000002403_02360
Location and strand information: 35962 - 36879 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002403_69|CGC1
Gene ID: MGYG000002403_02361
Location and strand information: 36941 - 38659 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002403_69|CGC1
Gene ID: MGYG000002403_02362
Location and strand information: 38736 - 39785 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YesR
Protein isoelectric point: 4.7003
Protein molecular weight: 40002.54
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002403_69|CGC1
Gene ID: MGYG000002403_02363
Location and strand information: 39754 - 41592 (+)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1591
Protein molecular weight: 69012.34
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002403_69|CGC1
Gene ID: MGYG000002403_02364
Location and strand information: 41609 - 43765 (+)
Family: GH112
Protein type: CAZyme
Protein description: D-galactosyl-beta-1->4-L-rhamnose phosphorylase
Protein isoelectric point: 5.8295
Protein molecular weight: 82136.98
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002403_69|CGC1
Gene ID: MGYG000002403_02365
Location and strand information: 44498 - 45553 (+)
Family: null
Protein type: null
Protein description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)

Gene clsuter ID: MGYG000002403_69|CGC1
Gene ID: MGYG000002403_02366
Location and strand information: 45555 - 50156 (+)
Family: null
Protein type: null
Protein description: DNA polymerase III PolC-type

Gene clsuter ID: MGYG000002403_69|CGC1
Gene ID: MGYG000002403_02367
Location and strand information: 50370 - 51227 (-)
Family: 3.A.1.1.34
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000002403_69|CGC1
Gene ID: MGYG000002403_02368
Location and strand information: 51217 - 52062 (-)
Family: 3.A.1.1.36
Protein type: TC
Protein description: sn-glycerol-3-phosphate transport system permease protein UgpA

Gene clsuter ID: MGYG000002403_69|CGC1
Gene ID: MGYG000002403_02369
Location and strand information: 52237 - 53571 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002403_69|CGC1
Gene ID: MGYG000002403_02370
Location and strand information: 53694 - 55217 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Regulator of RpoS

Gene clsuter ID: MGYG000002403_69|CGC1
Gene ID: MGYG000002403_02371
Location and strand information: 55314 - 57107 (-)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002403_02355	Vitamin B12 import ATP-binding protein BtuD	TC	26379	27242	-	3.A.1.149.1
MGYG000002403_02356	HTH-type transcriptional repressor YtrA	TF	27259	27633	-	GntR
MGYG000002403_02357	hypothetical protein	CAZyme	27928	33717	+	CE12\| PL11_1\| PL11\| CBM13\| CBM2\| CBM35
MGYG000002403_02358	HTH-type transcriptional activator RhaS	TF	33729	34655	-	HTH_AraC+HTH_AraC
MGYG000002403_02359	putative multiple-sugar transport system permease YteP	TC	34985	35947	+	3.A.1.1.10
MGYG000002403_02360	hypothetical protein	TC	35962	36879	+	3.A.1.1.10
MGYG000002403_02361	hypothetical protein	null	36941	38659	+	No domain
MGYG000002403_02362	Unsaturated rhamnogalacturonyl hydrolase YesR	CAZyme	38736	39785	+	GH105
MGYG000002403_02363	hypothetical protein	CAZyme	39754	41592	+	CE12
MGYG000002403_02364	D-galactosyl-beta-1->4-L-rhamnose phosphorylase	CAZyme	41609	43765	+	GH112
MGYG000002403_02365	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)	null	44498	45553	+	GcpE
MGYG000002403_02366	DNA polymerase III PolC-type	null	45555	50156	+	DNA_pol3_a_NI\| PHP\| RNase_T\| DNA_pol3_alpha\| DNA_pol3_alpha\| DNA_pol3_finger\| HHH_6
MGYG000002403_02367	L-arabinose transport system permease protein AraQ	TC	50370	51227	-	3.A.1.1.34
MGYG000002403_02368	sn-glycerol-3-phosphate transport system permease protein UgpA	TC	51217	52062	-	3.A.1.1.36
MGYG000002403_02369	hypothetical protein	STP	52237	53571	-	SBP_bac_1
MGYG000002403_02370	Regulator of RpoS	TF	53694	55217	-	HTH_AraC+HTH_AraC
MGYG000002403_02371	hypothetical protein	TC	55314	57107	-	8.A.59.2.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature