logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000002414_1|CGC38

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000002414_01798
L-arabinose transport system permease protein AraQ
TC 2086235 2087068 - 3.A.1.1.45
MGYG000002414_01799
sn-glycerol-3-phosphate transport system permease protein UgpA
TC 2087068 2087958 - 3.A.1.1.42
MGYG000002414_01800
hypothetical protein
TC 2088147 2090018 + 8.A.59.2.1
MGYG000002414_01801
HTH-type transcriptional activator RhaR
TF 2090011 2091654 + HTH_AraC+HTH_AraC
MGYG000002414_01802
hypothetical protein
null 2091780 2093090 + SBP_bac_8
MGYG000002414_01803
hypothetical protein
CAZyme 2093210 2095303 + GH36
MGYG000002414_01804
hypothetical protein
null 2095382 2096176 - HATPase_c_5
MGYG000002414_01805
hypothetical protein
TF 2096173 2096922 - LytTR
MGYG000002414_01806
Lipid A export ATP-binding/permease protein MsbA
TC 2097105 2098832 + 3.A.1.135.5
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by dbCAN-PUL is raffinose download this fig


Genomic location