dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002468_14|CGC1
Gene ID: MGYG000002468_02516
Location and strand information: 66323 - 66808 (-)
Family: 1.A.29.1.5
Protein type: TC
Protein description: Acid-activated urea channel

Gene clsuter ID: MGYG000002468_14|CGC1
Gene ID: MGYG000002468_02517
Location and strand information: 66988 - 67995 (+)
Family: null
Protein type: null
Protein description: Adenosine deaminase

Gene clsuter ID: MGYG000002468_14|CGC1
Gene ID: MGYG000002468_02518
Location and strand information: 68063 - 70813 (-)
Family: GH85|CBM32
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.7033
Protein molecular weight: 100818.01
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002468_14|CGC1
Gene ID: MGYG000002468_02519
Location and strand information: 70998 - 72305 (-)
Family: GH20
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.9166
Protein molecular weight: 50515
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002468_14|CGC1
Gene ID: MGYG000002468_02520
Location and strand information: 72298 - 73161 (-)
Family: null
Protein type: null
Protein description: Putative fructokinase

Gene clsuter ID: MGYG000002468_14|CGC1
Gene ID: MGYG000002468_02521
Location and strand information: 73180 - 75870 (-)
Family: GH38
Protein type: CAZyme
Protein description: Mannosylglycerate hydrolase
Protein isoelectric point: 4.9732
Protein molecular weight: 102338.79
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002468_14|CGC1
Gene ID: MGYG000002468_02522
Location and strand information: 75894 - 77183 (-)
Family: GH125
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.4433
Protein molecular weight: 48799.79
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002468_14|CGC1
Gene ID: MGYG000002468_02523
Location and strand information: 77345 - 78379 (+)
Family: GntR
Protein type: TF
Protein description: Arabinose metabolism transcriptional repressor

Gene clsuter ID: MGYG000002468_14|CGC1
Gene ID: MGYG000002468_02524
Location and strand information: 78383 - 80524 (+)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7509
Protein molecular weight: 81656.09
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002468_14|CGC1
Gene ID: MGYG000002468_02525
Location and strand information: 80584 - 82080 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000002468_14|CGC1
Gene ID: MGYG000002468_02526
Location and strand information: 82131 - 83861 (-)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002468_14|CGC1
Gene ID: MGYG000002468_02527
Location and strand information: 83854 - 84468 (-)
Family: 9.B.28.1.11
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002468_14|CGC1
Gene ID: MGYG000002468_02528
Location and strand information: 84644 - 86110 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002468_14|CGC1
Gene ID: MGYG000002468_02529
Location and strand information: 86232 - 87152 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000002468_14|CGC1
Gene ID: MGYG000002468_02530
Location and strand information: 87168 - 88115 (-)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002468_02518	GH85_e0\|CBM32_e114\|3.2.1.96\|3.2.1.113\|3.2.1.-	hostglycan
MGYG000002468_02519	GH20_e24
MGYG000002468_02521	GH38_e0\|3.2.1.-	alpha-mannan
MGYG000002468_02522	GH125_e0
MGYG000002468_02524	GH92_e1\|3.2.1.113	hostglycan

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is host glycan

Substrate predicted by dbCAN-PUL is alpha-mannan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002468_02516	Acid-activated urea channel	TC	66323	66808	-	1.A.29.1.5
MGYG000002468_02517	Adenosine deaminase	null	66988	67995	+	A_deaminase
MGYG000002468_02518	hypothetical protein	CAZyme	68063	70813	-	GH85\| CBM32
MGYG000002468_02519	hypothetical protein	CAZyme	70998	72305	-	GH20
MGYG000002468_02520	Putative fructokinase	null	72298	73161	-	ROK
MGYG000002468_02521	Mannosylglycerate hydrolase	CAZyme	73180	75870	-	GH38
MGYG000002468_02522	hypothetical protein	CAZyme	75894	77183	-	GH125
MGYG000002468_02523	Arabinose metabolism transcriptional repressor	TF	77345	78379	+	GntR
MGYG000002468_02524	hypothetical protein	CAZyme	78383	80524	+	GH92
MGYG000002468_02525	HTH-type transcriptional activator RhaR	TF	80584	82080	-	HTH_AraC+HTH_AraC
MGYG000002468_02526	hypothetical protein	TC	82131	83861	-	8.A.59.2.1
MGYG000002468_02527	hypothetical protein	TC	83854	84468	-	9.B.28.1.11
MGYG000002468_02528	hypothetical protein	STP	84644	86110	-	SBP_bac_1
MGYG000002468_02529	L-arabinose transport system permease protein AraQ	TC	86232	87152	-	3.A.1.1.29
MGYG000002468_02530	putative multiple-sugar transport system permease YteP	TC	87168	88115	-	3.A.1.1.10
Protein ID	Protein Name	Type	Start	End	Strand	Signature