dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002470_7|CGC4
Gene ID: MGYG000002470_03977
Location and strand information: 150327 - 153494 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002470_7|CGC4
Gene ID: MGYG000002470_03978
Location and strand information: 153501 - 155546 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002470_7|CGC4
Gene ID: MGYG000002470_03979
Location and strand information: 155595 - 158411 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002470_7|CGC4
Gene ID: MGYG000002470_03980
Location and strand information: 158441 - 160174 (+)
Family: 8.A.46.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002470_7|CGC4
Gene ID: MGYG000002470_03981
Location and strand information: 160306 - 163164 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 7.5527
Protein molecular weight: 109979.68
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_7|CGC4
Gene ID: MGYG000002470_03982
Location and strand information: 163274 - 164863 (-)
Family: GH43|GH43_12
Protein type: CAZyme
Protein description: Non-reducing end alpha-L-arabinofuranosidase BoGH43B
Protein isoelectric point: 7.6377
Protein molecular weight: 60035.26
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_7|CGC4
Gene ID: MGYG000002470_03983
Location and strand information: 164899 - 169185 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002470_7|CGC4
Gene ID: MGYG000002470_03984
Location and strand information: 169396 - 169938 (-)
Family: GerE
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002470_7|CGC4
Gene ID: MGYG000002470_03985
Location and strand information: 170102 - 173365 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002470_03977	hypothetical protein	TC	150327	153494	+	1.B.14.6.1
MGYG000002470_03978	hypothetical protein	null	153501	155546	+	SusD_RagB
MGYG000002470_03979	TonB-dependent receptor SusC	TC	155595	158411	+	1.B.14.6.1
MGYG000002470_03980	hypothetical protein	TC	158441	160174	+	8.A.46.1.3
MGYG000002470_03981	Beta-galactosidase	CAZyme	160306	163164	+	GH2
MGYG000002470_03982	Non-reducing end alpha-L-arabinofuranosidase BoGH43B	CAZyme	163274	164863	-	GH43\| GH43_12
MGYG000002470_03983	Sensor histidine kinase RcsC	TF	164899	169185	-	HTH_AraC
MGYG000002470_03984	hypothetical protein	TF	169396	169938	-	GerE
MGYG000002470_03985	hypothetical protein	TC	170102	173365	+	1.B.14.6.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature