dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002470_8|CGC5
Gene ID: MGYG000002470_04428
Location and strand information: 267941 - 269509 (-)
Family: GH30_4|GH30
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4351
Protein molecular weight: 59436.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_8|CGC5
Gene ID: MGYG000002470_04429
Location and strand information: 269700 - 273740 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002470_8|CGC5
Gene ID: MGYG000002470_04430
Location and strand information: 273933 - 277199 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002470_8|CGC5
Gene ID: MGYG000002470_04431
Location and strand information: 277211 - 279052 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002470_8|CGC5
Gene ID: MGYG000002470_04432
Location and strand information: 279068 - 279742 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002470_8|CGC5
Gene ID: MGYG000002470_04433
Location and strand information: 279852 - 282287 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase BoGH2A
Protein isoelectric point: 6.1003
Protein molecular weight: 91231.57
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_8|CGC5
Gene ID: MGYG000002470_04434
Location and strand information: 282551 - 282760 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002470_8|CGC5
Gene ID: MGYG000002470_04435
Location and strand information: 282968 - 283402 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002470_8|CGC5
Gene ID: MGYG000002470_04436
Location and strand information: 283546 - 285012 (-)
Family: GH30_2|GH30
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.9898
Protein molecular weight: 56696.96
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_8|CGC5
Gene ID: MGYG000002470_04437
Location and strand information: 285433 - 288051 (+)
Family: null
Protein type: null
Protein description: DNA mismatch repair protein MutS

Gene clsuter ID: MGYG000002470_8|CGC5
Gene ID: MGYG000002470_04438
Location and strand information: 288105 - 292166 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002470_8|CGC5
Gene ID: MGYG000002470_04439
Location and strand information: 292325 - 293584 (+)
Family: GH76
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.312
Protein molecular weight: 47835.11
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_8|CGC5
Gene ID: MGYG000002470_04440
Location and strand information: 293574 - 295523 (-)
Family: GH97
Protein type: CAZyme
Protein description: Retaining alpha-galactosidase
Protein isoelectric point: 7.4142
Protein molecular weight: 74677.19
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_8|CGC5
Gene ID: MGYG000002470_04441
Location and strand information: 295716 - 299345 (+)
Family: CBM32|GH38
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.8611
Protein molecular weight: 135542.7
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_8|CGC5
Gene ID: MGYG000002470_04442
Location and strand information: 299540 - 302056 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002470_8|CGC5
Gene ID: MGYG000002470_04443
Location and strand information: 302066 - 303529 (-)
Family: GH125
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4164
Protein molecular weight: 55042.88
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_8|CGC5
Gene ID: MGYG000002470_04444
Location and strand information: 303565 - 304767 (-)
Family: GH76
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.4757
Protein molecular weight: 45814.55
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002470_04428	GH30_e50\|3.2.1.38	beta-fucosides
MGYG000002470_04433	GH2_e38\|3.2.1.23	beta-galactan
MGYG000002470_04436	GH30_e23
MGYG000002470_04439	GH76_e9
MGYG000002470_04440	GH97_e20\|3.2.1.22	alpha-glucan
MGYG000002470_04441	GH38_e31\|3.2.1.113\|3.2.1.-	hostglycan\|alpha-mannan
MGYG000002470_04443	GH125_e1\|3.2.1.-	alpha-mannan
MGYG000002470_04444	GH76_e1\|3.2.1.101	alpha-mannan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is alpha-mannan

Substrate predicted by dbCAN-PUL is alpha-mannan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002470_04428	hypothetical protein	CAZyme	267941	269509	-	GH30_4\| GH30
MGYG000002470_04429	Sensor histidine kinase RcsC	TF	269700	273740	+	HTH_AraC
MGYG000002470_04430	TonB-dependent receptor SusC	TC	273933	277199	+	1.B.14.6.1
MGYG000002470_04431	hypothetical protein	null	277211	279052	+	SusD-like_3\| SusD_RagB
MGYG000002470_04432	hypothetical protein	null	279068	279742	+	DUF3823\| DUF3823_C
MGYG000002470_04433	Beta-galactosidase BoGH2A	CAZyme	279852	282287	-	GH2
MGYG000002470_04434	hypothetical protein	null	282551	282760	+	No domain
MGYG000002470_04435	hypothetical protein	null	282968	283402	-	DUF6078
MGYG000002470_04436	hypothetical protein	CAZyme	283546	285012	-	GH30_2\| GH30
MGYG000002470_04437	DNA mismatch repair protein MutS	null	285433	288051	+	MutS_I\| MutS_II\| MutS_III\| MutS_IV\| MutS_V
MGYG000002470_04438	Sensor histidine kinase RcsC	TF	288105	292166	-	HTH_AraC
MGYG000002470_04439	hypothetical protein	CAZyme	292325	293584	+	GH76
MGYG000002470_04440	Retaining alpha-galactosidase	CAZyme	293574	295523	-	GH97
MGYG000002470_04441	hypothetical protein	CAZyme	295716	299345	+	CBM32\| GH38
MGYG000002470_04442	hypothetical protein	null	299540	302056	-	DUF4964\| DUF5127\| DUF4965\| DUF1793
MGYG000002470_04443	hypothetical protein	CAZyme	302066	303529	-	GH125
MGYG000002470_04444	hypothetical protein	CAZyme	303565	304767	-	GH76
Protein ID	Protein Name	Type	Start	End	Strand	Signature