dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002478_1|CGC58
Gene ID: MGYG000002478_03009
Location and strand information: 3705186 - 3705758 (-)
Family: 2.A.107.1.2
Protein type: TC
Protein description: putative manganese efflux pump MntP

Gene clsuter ID: MGYG000002478_1|CGC58
Gene ID: MGYG000002478_03010
Location and strand information: 3705762 - 3706463 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC58
Gene ID: MGYG000002478_03011
Location and strand information: 3706411 - 3706905 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC58
Gene ID: MGYG000002478_03012
Location and strand information: 3706961 - 3707914 (-)
Family: GT2
Protein type: CAZyme
Protein description: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Protein isoelectric point: 8.3544
Protein molecular weight: 36371.09
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC58
Gene ID: MGYG000002478_03013
Location and strand information: 3707918 - 3708451 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC58
Gene ID: MGYG000002478_03015
Location and strand information: 3708892 - 3711327 (+)
Family: 2.A.16.2.2
Protein type: TC
Protein description: Reverse gyrase

Gene clsuter ID: MGYG000002478_1|CGC58
Gene ID: MGYG000002478_03016
Location and strand information: 3711732 - 3713027 (-)
Family: null
Protein type: null
Protein description: Enolase

Gene clsuter ID: MGYG000002478_1|CGC58
Gene ID: MGYG000002478_03017
Location and strand information: 3713193 - 3715637 (+)
Family: GH95|CBM13|CBM2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.1383
Protein molecular weight: 91889.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC58
Gene ID: MGYG000002478_03018
Location and strand information: 3715686 - 3716882 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 7.582
Protein molecular weight: 45350.8
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC58
Gene ID: MGYG000002478_03019
Location and strand information: 3717079 - 3718548 (+)
Family: GH140
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.7267
Protein molecular weight: 56438.55
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC58
Gene ID: MGYG000002478_03020
Location and strand information: 3718554 - 3722528 (+)
Family: GH33|CBM67|GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.5581
Protein molecular weight: 149918.96
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC58
Gene ID: MGYG000002478_03021
Location and strand information: 3722755 - 3724860 (+)
Family: GH127
Protein type: CAZyme
Protein description: Non-reducing end beta-L-arabinofuranosidase
Protein isoelectric point: 6.59
Protein molecular weight: 78788.74
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC58
Gene ID: MGYG000002478_03022
Location and strand information: 3724885 - 3726708 (+)
Family: GH141
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.174
Protein molecular weight: 68562.44
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC58
Gene ID: MGYG000002478_03023
Location and strand information: 3726723 - 3728867 (+)
Family: GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.9875
Protein molecular weight: 82007.57
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002478_03012	GT2_e1269
MGYG000002478_03017	GH95_e0\|CBM2_e92\|CBM13_e181\|3.2.1.-	xylan\|pectin
MGYG000002478_03018	GH105_e23\|3.2.1.-	pectin
MGYG000002478_03019	GH140_e1\|3.2.1.-	pectin
MGYG000002478_03020	GH78_e32\|GH33_e8\|3.2.1.40\|3.2.1.-	pectin\|alpha-rhamnoside
MGYG000002478_03021	GH127_e2\|3.2.1.-	carrageenan
MGYG000002478_03022	GH141_e0\|3.2.1.51	pectin
MGYG000002478_03023	GH78_e26\|3.2.1.40	alpha-rhamnoside

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002478_03009	putative manganese efflux pump MntP	TC	3705186	3705758	-	2.A.107.1.2
MGYG000002478_03010	hypothetical protein	null	3705762	3706463	-	DUF6048
MGYG000002478_03011	hypothetical protein	null	3706411	3706905	-	DUF6452
MGYG000002478_03012	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	CAZyme	3706961	3707914	-	GT2
MGYG000002478_03013	hypothetical protein	null	3707918	3708451	-	DUF4199
MGYG000002478_03015	Reverse gyrase	TC	3708892	3711327	+	2.A.16.2.2
MGYG000002478_03016	Enolase	null	3711732	3713027	-	Enolase_N\| Enolase_C
MGYG000002478_03017	hypothetical protein	CAZyme	3713193	3715637	+	GH95\| CBM13\| CBM2
MGYG000002478_03018	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	3715686	3716882	+	GH105
MGYG000002478_03019	hypothetical protein	CAZyme	3717079	3718548	+	GH140
MGYG000002478_03020	hypothetical protein	CAZyme	3718554	3722528	+	GH33\| CBM67\| GH78
MGYG000002478_03021	Non-reducing end beta-L-arabinofuranosidase	CAZyme	3722755	3724860	+	GH127
MGYG000002478_03022	hypothetical protein	CAZyme	3724885	3726708	+	GH141
MGYG000002478_03023	hypothetical protein	CAZyme	3726723	3728867	+	GH78
Protein ID	Protein Name	Type	Start	End	Strand	Signature