dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002478_1|CGC9
Gene ID: MGYG000002478_00199
Location and strand information: 316391 - 319543 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002478_1|CGC9
Gene ID: MGYG000002478_00200
Location and strand information: 319575 - 321713 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC9
Gene ID: MGYG000002478_00201
Location and strand information: 321804 - 322121 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC9
Gene ID: MGYG000002478_00202
Location and strand information: 322363 - 324144 (+)
Family: GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.186
Protein molecular weight: 66616.55
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC9
Gene ID: MGYG000002478_00203
Location and strand information: 324187 - 325470 (+)
Family: CE15
Protein type: CAZyme
Protein description: Carbohydrate esterase
Protein isoelectric point: 6.4277
Protein molecular weight: 48789.56
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC9
Gene ID: MGYG000002478_00204
Location and strand information: 325486 - 327339 (+)
Family: PL11
Protein type: CAZyme
Protein description: Rhamnogalacturonan endolyase YesW
Protein isoelectric point: 5.4822
Protein molecular weight: 69521.5
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC9
Gene ID: MGYG000002478_00205
Location and strand information: 327453 - 330740 (+)
Family: GH0|GH28|GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.5524
Protein molecular weight: 123336.12
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC9
Gene ID: MGYG000002478_00206
Location and strand information: 330881 - 332014 (+)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.6577
Protein molecular weight: 43934.95
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC9
Gene ID: MGYG000002478_00207
Location and strand information: 332133 - 334247 (-)
Family: GH42
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.7132
Protein molecular weight: 80937.89
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC9
Gene ID: MGYG000002478_00208
Location and strand information: 334226 - 336580 (-)
Family: CBM32|GH43_34|GH43_18|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.1679
Protein molecular weight: 89226.22
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC9
Gene ID: MGYG000002478_00209
Location and strand information: 336792 - 339659 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 8.3209
Protein molecular weight: 109999.54
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC9
Gene ID: MGYG000002478_00210
Location and strand information: 339678 - 340952 (+)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.3738
Protein molecular weight: 47827.94
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC9
Gene ID: MGYG000002478_00211
Location and strand information: 340970 - 342454 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4134
Protein molecular weight: 54873.04
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC9
Gene ID: MGYG000002478_00212
Location and strand information: 342432 - 343130 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC9
Gene ID: MGYG000002478_00213
Location and strand information: 343127 - 343930 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC9
Gene ID: MGYG000002478_00214
Location and strand information: 343946 - 345373 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.7251
Protein molecular weight: 52327.23
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC9
Gene ID: MGYG000002478_00215
Location and strand information: 345386 - 348148 (+)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.1994
Protein molecular weight: 104304.21
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002478_00202	GH78_e20
MGYG000002478_00203
MGYG000002478_00204	PL11_e1
MGYG000002478_00205	GH28_e44\|GH0_e132
MGYG000002478_00206	GH105_e14\|3.2.1.172	pectin
MGYG000002478_00207	GH42_e7
MGYG000002478_00208	GH43_e26\|CBM32_e74\|3.2.1.55	xylan
MGYG000002478_00209	GH2_e63\|3.2.1.23	beta-galactan
MGYG000002478_00210	CE12_e46
MGYG000002478_00211	GH28_e26\|3.2.1.-	pectin
MGYG000002478_00214	GH28_e52\|3.2.1.-	pectin
MGYG000002478_00215	GH106_e0\|3.2.1.174	pectin

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002478_00199	TonB-dependent receptor SusC	TC	316391	319543	+	1.B.14.6.1
MGYG000002478_00200	hypothetical protein	null	319575	321713	+	SusD-like_3\| SusD_RagB
MGYG000002478_00201	hypothetical protein	null	321804	322121	+	No domain
MGYG000002478_00202	hypothetical protein	CAZyme	322363	324144	+	GH78
MGYG000002478_00203	Carbohydrate esterase	CAZyme	324187	325470	+	CE15
MGYG000002478_00204	Rhamnogalacturonan endolyase YesW	CAZyme	325486	327339	+	PL11
MGYG000002478_00205	hypothetical protein	CAZyme	327453	330740	+	GH0\| GH28\| GH106
MGYG000002478_00206	hypothetical protein	CAZyme	330881	332014	+	GH105
MGYG000002478_00207	Beta-galactosidase	CAZyme	332133	334247	-	GH42
MGYG000002478_00208	hypothetical protein	CAZyme	334226	336580	-	CBM32\| GH43_34\| GH43_18\| GH43
MGYG000002478_00209	Beta-galactosidase	CAZyme	336792	339659	+	GH2
MGYG000002478_00210	hypothetical protein	CAZyme	339678	340952	+	CE12
MGYG000002478_00211	hypothetical protein	CAZyme	340970	342454	+	GH28
MGYG000002478_00212	hypothetical protein	null	342432	343130	+	DUF4450
MGYG000002478_00213	hypothetical protein	null	343127	343930	+	No domain
MGYG000002478_00214	hypothetical protein	CAZyme	343946	345373	+	GH28
MGYG000002478_00215	hypothetical protein	CAZyme	345386	348148	+	GH106
Protein ID	Protein Name	Type	Start	End	Strand	Signature