dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002529_2|CGC3
Gene ID: MGYG000002529_00412
Location and strand information: 72097 - 73872 (+)
Family: 1.B.33.2.4
Protein type: TC
Protein description: Translocation and assembly module subunit TamA

Gene clsuter ID: MGYG000002529_2|CGC3
Gene ID: MGYG000002529_00413
Location and strand information: 73967 - 77734 (+)
Family: 9.B.22.1.2
Protein type: TC
Protein description: Translocation and assembly module subunit TamB

Gene clsuter ID: MGYG000002529_2|CGC3
Gene ID: MGYG000002529_00416
Location and strand information: 78238 - 78747 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002529_2|CGC3
Gene ID: MGYG000002529_00417
Location and strand information: 78859 - 79197 (-)
Family: null
Protein type: null
Protein description: Ribosome-associated inhibitor A

Gene clsuter ID: MGYG000002529_2|CGC3
Gene ID: MGYG000002529_00418
Location and strand information: 79566 - 82070 (+)
Family: 9.B.34.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002529_2|CGC3
Gene ID: MGYG000002529_00419
Location and strand information: 82170 - 84071 (+)
Family: GH23
Protein type: CAZyme
Protein description: Soluble lytic murein transglycosylase
Protein isoelectric point: 10.2238
Protein molecular weight: 73298
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002529_2|CGC3
Gene ID: MGYG000002529_00420
Location and strand information: 84249 - 85247 (+)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional regulator GalR

Gene clsuter ID: MGYG000002529_2|CGC3
Gene ID: MGYG000002529_00421
Location and strand information: 85325 - 86389 (-)
Family: null
Protein type: null
Protein description: Phospho-2-dehydro-3-deoxyheptonate aldolase, Trp-sensitive

Gene clsuter ID: MGYG000002529_2|CGC3
Gene ID: MGYG000002529_00422
Location and strand information: 86515 - 88467 (-)
Family: 1.B.14.1.4
Protein type: TC
Protein description: Colicin I receptor

Gene clsuter ID: MGYG000002529_2|CGC3
Gene ID: MGYG000002529_00423
Location and strand information: 88734 - 89882 (+)
Family: null
Protein type: null
Protein description: Isochorismate synthase DhbC

Gene clsuter ID: MGYG000002529_2|CGC3
Gene ID: MGYG000002529_00424
Location and strand information: 89879 - 91525 (+)
Family: 4.C.1.1.6
Protein type: TC
Protein description: Enterobactin synthase component E

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002529_00412	Translocation and assembly module subunit TamA	TC	72097	73872	+	1.B.33.2.4
MGYG000002529_00413	Translocation and assembly module subunit TamB	TC	73967	77734	+	9.B.22.1.2
MGYG000002529_00416	hypothetical protein	null	78238	78747	+	Ribosomal_S4Pg
MGYG000002529_00417	Ribosome-associated inhibitor A	null	78859	79197	-	Ribosomal_S30AE
MGYG000002529_00418	hypothetical protein	TC	79566	82070	+	9.B.34.1.3
MGYG000002529_00419	Soluble lytic murein transglycosylase	CAZyme	82170	84071	+	GH23
MGYG000002529_00420	HTH-type transcriptional regulator GalR	TF	84249	85247	+	LacI
MGYG000002529_00421	Phospho-2-dehydro-3-deoxyheptonate aldolase, Trp-sensitive	null	85325	86389	-	DAHP_synth_1
MGYG000002529_00422	Colicin I receptor	TC	86515	88467	-	1.B.14.1.4
MGYG000002529_00423	Isochorismate synthase DhbC	null	88734	89882	+	Chorismate_bind
MGYG000002529_00424	Enterobactin synthase component E	TC	89879	91525	+	4.C.1.1.6
Protein ID	Protein Name	Type	Start	End	Strand	Signature