dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002540_3|CGC1
Gene ID: MGYG000002540_00172
Location and strand information: 600 - 2981 (-)
Family: 1.B.14.6.5
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002540_3|CGC1
Gene ID: MGYG000002540_00173
Location and strand information: 3103 - 7128 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002540_3|CGC1
Gene ID: MGYG000002540_00174
Location and strand information: 7379 - 9847 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase BoGH2A
Protein isoelectric point: 7.1181
Protein molecular weight: 92994.9
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002540_3|CGC1
Gene ID: MGYG000002540_00175
Location and strand information: 9902 - 12076 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002540_3|CGC1
Gene ID: MGYG000002540_00176
Location and strand information: 12150 - 15686 (+)
Family: CBM67|GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.2327
Protein molecular weight: 132090.88
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002540_3|CGC1
Gene ID: MGYG000002540_00177
Location and strand information: 15871 - 18678 (+)
Family: CBM13
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7901
Protein molecular weight: 105195.64
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002540_3|CGC1
Gene ID: MGYG000002540_00178
Location and strand information: 18780 - 19475 (-)
Family: 2.A.122.1.1
Protein type: TC
Protein description: Inner membrane protein YohK

Gene clsuter ID: MGYG000002540_3|CGC1
Gene ID: MGYG000002540_00179
Location and strand information: 19456 - 19806 (-)
Family: 1.E.14.1.13
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002540_3|CGC1
Gene ID: MGYG000002540_00180
Location and strand information: 19968 - 20147 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002540_3|CGC1
Gene ID: MGYG000002540_00181
Location and strand information: 20144 - 21559 (+)
Family: null
Protein type: null
Protein description: Alkaline phosphatase 3

Gene clsuter ID: MGYG000002540_3|CGC1
Gene ID: MGYG000002540_00182
Location and strand information: 21793 - 25062 (+)
Family: 1.B.14.6.2
Protein type: TC
Protein description: TonB-dependent receptor SusC

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinogalactan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002540_00172	hypothetical protein	TC	600	2981	-	1.B.14.6.5
MGYG000002540_00173	Sensor histidine kinase RcsC	TF	3103	7128	+	HTH_AraC+HTH_AraC
MGYG000002540_00174	Beta-galactosidase BoGH2A	CAZyme	7379	9847	+	GH2
MGYG000002540_00175	hypothetical protein	null	9902	12076	+	No domain
MGYG000002540_00176	hypothetical protein	CAZyme	12150	15686	+	CBM67\| GH78
MGYG000002540_00177	hypothetical protein	CAZyme	15871	18678	+	CBM13
MGYG000002540_00178	Inner membrane protein YohK	TC	18780	19475	-	2.A.122.1.1
MGYG000002540_00179	hypothetical protein	TC	19456	19806	-	1.E.14.1.13
MGYG000002540_00180	hypothetical protein	null	19968	20147	+	No domain
MGYG000002540_00181	Alkaline phosphatase 3	null	20144	21559	+	Alk_phosphatase
MGYG000002540_00182	TonB-dependent receptor SusC	TC	21793	25062	+	1.B.14.6.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature