dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002560_21|CGC1
Gene ID: MGYG000002560_02996
Location and strand information: 25555 - 27789 (-)
Family: GH139
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.2622
Protein molecular weight: 85540.02
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_21|CGC1
Gene ID: MGYG000002560_02997
Location and strand information: 27803 - 29227 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_21|CGC1
Gene ID: MGYG000002560_02998
Location and strand information: 29235 - 32459 (-)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4443
Protein molecular weight: 120482.02
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_21|CGC1
Gene ID: MGYG000002560_02999
Location and strand information: 32712 - 32987 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_21|CGC1
Gene ID: MGYG000002560_03000
Location and strand information: 32928 - 35771 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.6854
Protein molecular weight: 106634.46
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_21|CGC1
Gene ID: MGYG000002560_03001
Location and strand information: 36085 - 39285 (-)
Family: CBM67|GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.4266
Protein molecular weight: 121884.66
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_21|CGC1
Gene ID: MGYG000002560_03002
Location and strand information: 39554 - 41152 (-)
Family: 2.A.81.1.2
Protein type: TC
Protein description: Aspartate/alanine antiporter

Gene clsuter ID: MGYG000002560_21|CGC1
Gene ID: MGYG000002560_03003
Location and strand information: 41381 - 45709 (-)
Family: CBM57|GH137|GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.6752
Protein molecular weight: 164181.71
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_21|CGC1
Gene ID: MGYG000002560_03004
Location and strand information: 45715 - 48420 (-)
Family: GH138
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.2225
Protein molecular weight: 101585.72
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_21|CGC1
Gene ID: MGYG000002560_03005
Location and strand information: 48589 - 49530 (+)
Family: null
Protein type: null
Protein description: Tyrosine recombinase XerC

Gene clsuter ID: MGYG000002560_21|CGC1
Gene ID: MGYG000002560_03006
Location and strand information: 49966 - 51369 (+)
Family: 9.B.18.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_21|CGC1
Gene ID: MGYG000002560_03007
Location and strand information: 51422 - 52213 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_21|CGC1
Gene ID: MGYG000002560_03008
Location and strand information: 52223 - 54631 (+)
Family: 8.A.3.3.4
Protein type: TC
Protein description: hypothetical protein

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002560_02996	GH139_e0\|3.2.1.-	pectin
MGYG000002560_02998	GH106_e13\|3.2.1.40	pectin
MGYG000002560_03000	GH2_e77\|3.2.1.-	pectin
MGYG000002560_03001	GH2_e4\|CBM67_e8\|3.2.1.23	beta-galactan
MGYG000002560_03003	GH2_e49\|GH137_e0\|CBM57_e1\|3.2.1.31\|3.2.1.185	pectin\|beta-glucuronan
MGYG000002560_03004	GH138_e0\|3.2.1.-

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002560_02996	hypothetical protein	CAZyme	25555	27789	-	GH139
MGYG000002560_02997	hypothetical protein	null	27803	29227	-	SASA
MGYG000002560_02998	hypothetical protein	CAZyme	29235	32459	-	GH106
MGYG000002560_02999	hypothetical protein	null	32712	32987	+	No domain
MGYG000002560_03000	Beta-galactosidase	CAZyme	32928	35771	-	GH2
MGYG000002560_03001	Beta-galactosidase	CAZyme	36085	39285	-	CBM67\| GH2
MGYG000002560_03002	Aspartate/alanine antiporter	TC	39554	41152	-	2.A.81.1.2
MGYG000002560_03003	Beta-galactosidase	CAZyme	41381	45709	-	CBM57\| GH137\| GH2
MGYG000002560_03004	hypothetical protein	CAZyme	45715	48420	-	GH138
MGYG000002560_03005	Tyrosine recombinase XerC	null	48589	49530	+	Phage_int_SAM_5\| Phage_integrase
MGYG000002560_03006	hypothetical protein	TC	49966	51369	+	9.B.18.1.1
MGYG000002560_03007	hypothetical protein	null	51422	52213	+	Poly_export\| SLBB
MGYG000002560_03008	hypothetical protein	TC	52223	54631	+	8.A.3.3.4
Protein ID	Protein Name	Type	Start	End	Strand	Signature