dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002560_23|CGC1
Gene ID: MGYG000002560_03150
Location and strand information: 60964 - 62484 (-)
Family: GH29
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.1126
Protein molecular weight: 57986.04
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_23|CGC1
Gene ID: MGYG000002560_03151
Location and strand information: 62507 - 62890 (-)
Family: null
Protein type: null
Protein description: L-fucose mutarotase

Gene clsuter ID: MGYG000002560_23|CGC1
Gene ID: MGYG000002560_03152
Location and strand information: 63243 - 64775 (-)
Family: null
Protein type: null
Protein description: SusD-like protein

Gene clsuter ID: MGYG000002560_23|CGC1
Gene ID: MGYG000002560_03153
Location and strand information: 64786 - 67989 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002560_23|CGC1
Gene ID: MGYG000002560_03154
Location and strand information: 68306 - 69166 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000002560_23|CGC1
Gene ID: MGYG000002560_03155
Location and strand information: 69172 - 70188 (-)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional repressor CytR

Gene clsuter ID: MGYG000002560_23|CGC1
Gene ID: MGYG000002560_03156
Location and strand information: 70338 - 71270 (+)
Family: 8.A.5.1.6
Protein type: TC
Protein description: D-threo-aldose 1-dehydrogenase

Gene clsuter ID: MGYG000002560_23|CGC1
Gene ID: MGYG000002560_03157
Location and strand information: 71286 - 72209 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_23|CGC1
Gene ID: MGYG000002560_03158
Location and strand information: 72228 - 73244 (+)
Family: null
Protein type: null
Protein description: putative zinc-type alcohol dehydrogenase-like protein YjmD

Gene clsuter ID: MGYG000002560_23|CGC1
Gene ID: MGYG000002560_03159
Location and strand information: 73341 - 73985 (-)
Family: 2.A.95.1.4
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is agarose download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002560_03150	hypothetical protein	CAZyme	60964	62484	-	GH29
MGYG000002560_03151	L-fucose mutarotase	null	62507	62890	-	rhaM
MGYG000002560_03152	SusD-like protein	null	63243	64775	-	SusD-like_3\| SusD_RagB
MGYG000002560_03153	TonB-dependent receptor SusC	TC	64786	67989	-	1.B.14.6.1
MGYG000002560_03154	HTH-type transcriptional activator RhaR	TF	68306	69166	+	HTH_AraC+HTH_AraC
MGYG000002560_03155	HTH-type transcriptional repressor CytR	TF	69172	70188	-	LacI
MGYG000002560_03156	D-threo-aldose 1-dehydrogenase	TC	70338	71270	+	8.A.5.1.6
MGYG000002560_03157	hypothetical protein	null	71286	72209	+	Amidohydro_2
MGYG000002560_03158	putative zinc-type alcohol dehydrogenase-like protein YjmD	null	72228	73244	+	ADH_N\| ADH_zinc_N
MGYG000002560_03159	hypothetical protein	TC	73341	73985	-	2.A.95.1.4
Protein ID	Protein Name	Type	Start	End	Strand	Signature