dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002561_5|CGC3
Gene ID: MGYG000002561_00982
Location and strand information: 117528 - 119603 (-)
Family: CBM58|GH13_36|GH13
Protein type: CAZyme
Protein description: Alpha-amylase SusG
Protein isoelectric point: 4.8264
Protein molecular weight: 77343.3
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002561_5|CGC3
Gene ID: MGYG000002561_00983
Location and strand information: 119693 - 119941 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002561_5|CGC3
Gene ID: MGYG000002561_00984
Location and strand information: 120419 - 121789 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002561_5|CGC3
Gene ID: MGYG000002561_00985
Location and strand information: 121886 - 122986 (-)
Family: GH53
Protein type: CAZyme
Protein description: Arabinogalactan endo-beta-1,4-galactanase
Protein isoelectric point: 5.437
Protein molecular weight: 41666.54
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002561_5|CGC3
Gene ID: MGYG000002561_00986
Location and strand information: 123073 - 124485 (-)
Family: null
Protein type: null
Protein description: Outer membrane protein SusF

Gene clsuter ID: MGYG000002561_5|CGC3
Gene ID: MGYG000002561_00987
Location and strand information: 124512 - 125696 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002561_5|CGC3
Gene ID: MGYG000002561_00988
Location and strand information: 125718 - 127319 (-)
Family: 8.A.46.1.1
Protein type: TC
Protein description: Starch-binding protein SusD

Gene clsuter ID: MGYG000002561_5|CGC3
Gene ID: MGYG000002561_00989
Location and strand information: 127367 - 130462 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002561_5|CGC3
Gene ID: MGYG000002561_00990
Location and strand information: 131399 - 133126 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002561_5|CGC3
Gene ID: MGYG000002561_00991
Location and strand information: 133206 - 135692 (-)
Family: GH2|CBM67
Protein type: CAZyme
Protein description: Beta-galactosidase BoGH2A
Protein isoelectric point: 6.3935
Protein molecular weight: 92797.98
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002561_5|CGC3
Gene ID: MGYG000002561_00992
Location and strand information: 135724 - 136902 (-)
Family: GH53
Protein type: CAZyme
Protein description: Arabinogalactan endo-beta-1,4-galactanase
Protein isoelectric point: 5.1799
Protein molecular weight: 43991.95
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002561_5|CGC3
Gene ID: MGYG000002561_00993
Location and strand information: 137136 - 138140 (+)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional repressor CytR

Gene clsuter ID: MGYG000002561_5|CGC3
Gene ID: MGYG000002561_00994
Location and strand information: 138156 - 139529 (+)
Family: 2.A.2.6.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002561_5|CGC3
Gene ID: MGYG000002561_00995
Location and strand information: 139586 - 141913 (+)
Family: GH65
Protein type: CAZyme
Protein description: Maltose phosphorylase
Protein isoelectric point: 5.9056
Protein molecular weight: 89935.63
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002561_5|CGC3
Gene ID: MGYG000002561_00996
Location and strand information: 141946 - 142155 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002561_5|CGC3
Gene ID: MGYG000002561_00997
Location and strand information: 142304 - 143356 (+)
Family: null
Protein type: null
Protein description: Multidrug resistance protein MdtA

Gene clsuter ID: MGYG000002561_5|CGC3
Gene ID: MGYG000002561_00998
Location and strand information: 143637 - 146669 (+)
Family: 2.A.6.2.37
Protein type: TC
Protein description: Multidrug resistance protein MexB

Gene clsuter ID: MGYG000002561_5|CGC3
Gene ID: MGYG000002561_00999
Location and strand information: 147005 - 148273 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002561_5|CGC3
Gene ID: MGYG000002561_01000
Location and strand information: 148453 - 149688 (-)
Family: 3.B.1.1.2
Protein type: TC
Protein description: Glutaconyl-CoA decarboxylase subunit beta

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002561_00982	Alpha-amylase SusG	CAZyme	117528	119603	-	CBM58\| GH13_36\| GH13
MGYG000002561_00983	hypothetical protein	null	119693	119941	-	No domain
MGYG000002561_00984	hypothetical protein	null	120419	121789	+	AAA_14\| DUF4143
MGYG000002561_00985	Arabinogalactan endo-beta-1,4-galactanase	CAZyme	121886	122986	-	GH53
MGYG000002561_00986	Outer membrane protein SusF	null	123073	124485	-	DUF5115\| SusF_SusE
MGYG000002561_00987	hypothetical protein	null	124512	125696	-	SusE
MGYG000002561_00988	Starch-binding protein SusD	TC	125718	127319	-	8.A.46.1.1
MGYG000002561_00989	TonB-dependent receptor SusC	TC	127367	130462	-	1.B.14.6.1
MGYG000002561_00990	hypothetical protein	null	131399	133126	-	AAA-ATPase_like\| PDDEXK_9
MGYG000002561_00991	Beta-galactosidase BoGH2A	CAZyme	133206	135692	-	GH2\| CBM67
MGYG000002561_00992	Arabinogalactan endo-beta-1,4-galactanase	CAZyme	135724	136902	-	GH53
MGYG000002561_00993	HTH-type transcriptional repressor CytR	TF	137136	138140	+	LacI
MGYG000002561_00994	hypothetical protein	TC	138156	139529	+	2.A.2.6.2
MGYG000002561_00995	Maltose phosphorylase	CAZyme	139586	141913	+	GH65
MGYG000002561_00996	hypothetical protein	null	141946	142155	+	No domain
MGYG000002561_00997	Multidrug resistance protein MdtA	null	142304	143356	+	HlyD_D23
MGYG000002561_00998	Multidrug resistance protein MexB	TC	143637	146669	+	2.A.6.2.37
MGYG000002561_00999	hypothetical protein	null	147005	148273	+	OEP\| OEP
MGYG000002561_01000	Glutaconyl-CoA decarboxylase subunit beta	TC	148453	149688	-	3.B.1.1.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature