dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002601_3|CGC1
Gene ID: MGYG000002601_00162
Location and strand information: 1485 - 2456 (-)
Family: CBM42|GH43|GH43_26
Protein type: CAZyme
Protein description: Extracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 6.5795
Protein molecular weight: 37517.8
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002601_3|CGC1
Gene ID: MGYG000002601_00163
Location and strand information: 2616 - 2786 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002601_3|CGC1
Gene ID: MGYG000002601_00164
Location and strand information: 2811 - 3959 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002601_3|CGC1
Gene ID: MGYG000002601_00165
Location and strand information: 4187 - 5818 (+)
Family: 3.A.1.5.39
Protein type: TC
Protein description: Periplasmic dipeptide transport protein

Gene clsuter ID: MGYG000002601_3|CGC1
Gene ID: MGYG000002601_00166
Location and strand information: 5919 - 6893 (+)
Family: 3.A.1.5.3
Protein type: TC
Protein description: Nickel transport system permease protein NikB

Gene clsuter ID: MGYG000002601_3|CGC1
Gene ID: MGYG000002601_00167
Location and strand information: 6890 - 7753 (+)
Family: 3.A.1.5.39
Protein type: TC
Protein description: Glutathione transport system permease protein GsiD

Gene clsuter ID: MGYG000002601_3|CGC1
Gene ID: MGYG000002601_00168
Location and strand information: 7757 - 8734 (+)
Family: 3.A.1.5.2
Protein type: TC
Protein description: Oligopeptide transport ATP-binding protein OppD

Gene clsuter ID: MGYG000002601_3|CGC1
Gene ID: MGYG000002601_00169
Location and strand information: 8740 - 9687 (+)
Family: 3.A.1.5.15
Protein type: TC
Protein description: Oligopeptide transport ATP-binding protein OppF

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinoxylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002601_00162	Extracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	1485	2456	-	CBM42\| GH43\| GH43_26
MGYG000002601_00163	hypothetical protein	null	2616	2786	-	No domain
MGYG000002601_00164	hypothetical protein	null	2811	3959	-	No domain
MGYG000002601_00165	Periplasmic dipeptide transport protein	TC	4187	5818	+	3.A.1.5.39
MGYG000002601_00166	Nickel transport system permease protein NikB	TC	5919	6893	+	3.A.1.5.3
MGYG000002601_00167	Glutathione transport system permease protein GsiD	TC	6890	7753	+	3.A.1.5.39
MGYG000002601_00168	Oligopeptide transport ATP-binding protein OppD	TC	7757	8734	+	3.A.1.5.2
MGYG000002601_00169	Oligopeptide transport ATP-binding protein OppF	TC	8740	9687	+	3.A.1.5.15
Protein ID	Protein Name	Type	Start	End	Strand	Signature