dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002960_21|CGC1
Gene ID: MGYG000002960_00897
Location and strand information: 5549 - 6973 (+)
Family: GH5_21
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3164
Protein molecular weight: 54092.95
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002960_21|CGC1
Gene ID: MGYG000002960_00898
Location and strand information: 7100 - 10246 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002960_21|CGC1
Gene ID: MGYG000002960_00899
Location and strand information: 10266 - 12230 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002960_21|CGC1
Gene ID: MGYG000002960_00900
Location and strand information: 12275 - 15142 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002960_21|CGC1
Gene ID: MGYG000002960_00901
Location and strand information: 15165 - 16982 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002960_21|CGC1
Gene ID: MGYG000002960_00902
Location and strand information: 17002 - 18051 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002960_21|CGC1
Gene ID: MGYG000002960_00903
Location and strand information: 18093 - 20321 (+)
Family: GH10|CBM4
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.5407
Protein molecular weight: 81772.51
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002960_21|CGC1
Gene ID: MGYG000002960_00904
Location and strand information: 20352 - 20789 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002960_21|CGC1
Gene ID: MGYG000002960_00905
Location and strand information: 21000 - 22859 (+)
Family: GH43_10|GH43|GH5_21
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.1673
Protein molecular weight: 70940.49
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002960_21|CGC1
Gene ID: MGYG000002960_00906
Location and strand information: 22915 - 24423 (-)
Family: TrmB
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002960_21|CGC1
Gene ID: MGYG000002960_00907
Location and strand information: 24775 - 25707 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002960_21|CGC1
Gene ID: MGYG000002960_00908
Location and strand information: 25740 - 27650 (+)
Family: CE6|CE1|CE0|CBM48
Protein type: CAZyme
Protein description: Carbohydrate acetyl esterase/feruloyl esterase
Protein isoelectric point: 7.7866
Protein molecular weight: 71600.02
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002960_21|CGC1
Gene ID: MGYG000002960_00909
Location and strand information: 27852 - 28556 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002960_21|CGC1
Gene ID: MGYG000002960_00910
Location and strand information: 28556 - 30067 (+)
Family: GH43_7|CBM13|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0041
Protein molecular weight: 56273.55
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002960_21|CGC1
Gene ID: MGYG000002960_00911
Location and strand information: 30513 - 31124 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002960_21|CGC1
Gene ID: MGYG000002960_00912
Location and strand information: 31133 - 32737 (+)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000002960_21|CGC1
Gene ID: MGYG000002960_00913
Location and strand information: 32918 - 35455 (+)
Family: GH31
Protein type: CAZyme
Protein description: Alpha-xylosidase BoGH31A
Protein isoelectric point: 8.6244
Protein molecular weight: 97009.33
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002960_21|CGC1
Gene ID: MGYG000002960_00914
Location and strand information: 35568 - 38174 (+)
Family: GH3
Protein type: CAZyme
Protein description: Xylan 1,4-beta-xylosidase
Protein isoelectric point: 6.895
Protein molecular weight: 97443.8
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002960_00897
MGYG000002960_00903	GH10_e9\|CBM4_e10\|3.2.1.8	xylan
MGYG000002960_00905	GH43_e200
MGYG000002960_00908	CE6_e7\|CE1_e61\|3.1.1.72	xylan
MGYG000002960_00910	GH43_e203\|CBM13_e150
MGYG000002960_00913	GH31_e48
MGYG000002960_00914	GH3_e159\|3.2.1.55\|3.2.1.37\|3.2.1.21\|3.2.1.-	xylan\|beta-glucan\|arabinan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is xylan

Substrate predicted by dbCAN-PUL is xylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002960_00897	hypothetical protein	CAZyme	5549	6973	+	GH5_21
MGYG000002960_00898	TonB-dependent receptor SusC	TC	7100	10246	+	1.B.14.6.1
MGYG000002960_00899	hypothetical protein	null	10266	12230	+	SusD-like_3\| SusD_RagB
MGYG000002960_00900	hypothetical protein	TC	12275	15142	+	1.B.14.6.1
MGYG000002960_00901	hypothetical protein	null	15165	16982	+	SusD-like_3\| SusD_RagB
MGYG000002960_00902	hypothetical protein	null	17002	18051	+	DUF1735\| DUF5627
MGYG000002960_00903	hypothetical protein	CAZyme	18093	20321	+	GH10\| CBM4
MGYG000002960_00904	hypothetical protein	null	20352	20789	+	No domain
MGYG000002960_00905	hypothetical protein	CAZyme	21000	22859	+	GH43_10\| GH43\| GH5_21
MGYG000002960_00906	hypothetical protein	TF	22915	24423	-	TrmB
MGYG000002960_00907	hypothetical protein	null	24775	25707	+	No domain
MGYG000002960_00908	Carbohydrate acetyl esterase/feruloyl esterase	CAZyme	25740	27650	+	CE6\| CE1\| CE0\| CBM48
MGYG000002960_00909	hypothetical protein	null	27852	28556	+	No domain
MGYG000002960_00910	hypothetical protein	CAZyme	28556	30067	+	GH43_7\| CBM13\| GH43
MGYG000002960_00911	hypothetical protein	null	30513	31124	+	HU-HIG
MGYG000002960_00912	HTH-type transcriptional activator RhaR	TF	31133	32737	+	HTH_AraC
MGYG000002960_00913	Alpha-xylosidase BoGH31A	CAZyme	32918	35455	+	GH31
MGYG000002960_00914	Xylan 1,4-beta-xylosidase	CAZyme	35568	38174	+	GH3
Protein ID	Protein Name	Type	Start	End	Strand	Signature