dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003099_20|CGC1
Gene ID: MGYG000003099_02412
Location and strand information: 1901 - 2734 (-)
Family: GH16_3|GH16
Protein type: CAZyme
Protein description: Glucan endo-1,3-beta-glucosidase A1
Protein isoelectric point: 5.3637
Protein molecular weight: 30998.85
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003099_20|CGC1
Gene ID: MGYG000003099_02413
Location and strand information: 2932 - 6885 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000003099_20|CGC1
Gene ID: MGYG000003099_02414
Location and strand information: 7108 - 9234 (+)
Family: 3.A.7.7.1
Protein type: TC
Protein description: DNA topoisomerase 3

Gene clsuter ID: MGYG000003099_20|CGC1
Gene ID: MGYG000003099_02415
Location and strand information: 9224 - 9739 (+)
Family: NUDIX
Protein type: STP
Protein description: Isopentenyl-diphosphate Delta-isomerase

Gene clsuter ID: MGYG000003099_20|CGC1
Gene ID: MGYG000003099_02416
Location and strand information: 9771 - 10250 (-)
Family: null
Protein type: null
Protein description: Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK

Gene clsuter ID: MGYG000003099_20|CGC1
Gene ID: MGYG000003099_02417
Location and strand information: 10370 - 12319 (-)
Family: 3.A.6.1.1
Protein type: TC
Protein description: Transcription termination factor Rho

Gene clsuter ID: MGYG000003099_20|CGC1
Gene ID: MGYG000003099_02418
Location and strand information: 12531 - 13865 (-)
Family: null
Protein type: null
Protein description: tRNA(Ile)-lysidine synthase

Gene clsuter ID: MGYG000003099_20|CGC1
Gene ID: MGYG000003099_02419
Location and strand information: 14046 - 14753 (+)
Family: 1.A.62.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003099_20|CGC1
Gene ID: MGYG000003099_02420
Location and strand information: 14772 - 15731 (+)
Family: GT2
Protein type: CAZyme
Protein description: putative glycosyltransferase
Protein isoelectric point: 7.4714
Protein molecular weight: 36396.05
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003099_20|CGC1
Gene ID: MGYG000003099_02421
Location and strand information: 15766 - 17487 (+)
Family: GT83
Protein type: CAZyme
Protein description: Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase
Protein isoelectric point: 8.8154
Protein molecular weight: 65595.53
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003099_20|CGC1
Gene ID: MGYG000003099_02422
Location and strand information: 17511 - 18191 (+)
Family: Trans_reg_C
Protein type: TF
Protein description: Transcriptional regulatory protein SrrA

Gene clsuter ID: MGYG000003099_20|CGC1
Gene ID: MGYG000003099_02423
Location and strand information: 18196 - 19980 (+)
Family: HisKA+HATPase_c
Protein type: STP
Protein description: Adaptive-response sensory-kinase SasA

Gene clsuter ID: MGYG000003099_20|CGC1
Gene ID: MGYG000003099_02424
Location and strand information: 20107 - 21753 (+)
Family: 4.C.1.1.4
Protein type: TC
Protein description: Long-chain-fatty-acid--CoA ligase

Gene clsuter ID: MGYG000003099_20|CGC1
Gene ID: MGYG000003099_02425
Location and strand information: 21755 - 22321 (+)
Family: Pribosyltran
Protein type: STP
Protein description: Xanthine phosphoribosyltransferase

Gene clsuter ID: MGYG000003099_20|CGC1
Gene ID: MGYG000003099_02426
Location and strand information: 22563 - 24524 (+)
Family: 1.B.14.15.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003099_20|CGC1
Gene ID: MGYG000003099_02427
Location and strand information: 24862 - 25275 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003099_20|CGC1
Gene ID: MGYG000003099_02428
Location and strand information: 25312 - 26175 (+)
Family: 3.D.6.1.2
Protein type: TC
Protein description: Electron transport complex subunit RsxB

Gene clsuter ID: MGYG000003099_20|CGC1
Gene ID: MGYG000003099_02429
Location and strand information: 26187 - 27521 (+)
Family: 3.D.6.1.2
Protein type: TC
Protein description: Electron transport complex subunit RnfC

Gene clsuter ID: MGYG000003099_20|CGC1
Gene ID: MGYG000003099_02430
Location and strand information: 27541 - 28488 (+)
Family: 3.D.6.1.2
Protein type: TC
Protein description: Electron transport complex subunit RsxD

Gene clsuter ID: MGYG000003099_20|CGC1
Gene ID: MGYG000003099_02431
Location and strand information: 28511 - 29125 (+)
Family: null
Protein type: null
Protein description: Electron transport complex subunit RsxG

Gene clsuter ID: MGYG000003099_20|CGC1
Gene ID: MGYG000003099_02432
Location and strand information: 29137 - 29721 (+)
Family: 3.D.6.1.2
Protein type: TC
Protein description: Electron transport complex subunit RnfE

Gene clsuter ID: MGYG000003099_20|CGC1
Gene ID: MGYG000003099_02433
Location and strand information: 29724 - 30305 (+)
Family: 3.D.6.1.2
Protein type: TC
Protein description: Electron transport complex subunit RsxA

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is beta-glucan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003099_02412	Glucan endo-1,3-beta-glucosidase A1	CAZyme	1901	2734	-	GH16_3\| GH16
MGYG000003099_02413	Sensor histidine kinase RcsC	TF	2932	6885	-	HTH_AraC+HTH_AraC
MGYG000003099_02414	DNA topoisomerase 3	TC	7108	9234	+	3.A.7.7.1
MGYG000003099_02415	Isopentenyl-diphosphate Delta-isomerase	STP	9224	9739	+	NUDIX
MGYG000003099_02416	Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK	null	9771	10250	-	tRNA_edit
MGYG000003099_02417	Transcription termination factor Rho	TC	10370	12319	-	3.A.6.1.1
MGYG000003099_02418	tRNA(Ile)-lysidine synthase	null	12531	13865	-	ATP_bind_3\| TilS_C
MGYG000003099_02419	hypothetical protein	TC	14046	14753	+	1.A.62.2.1
MGYG000003099_02420	putative glycosyltransferase	CAZyme	14772	15731	+	GT2
MGYG000003099_02421	Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase	CAZyme	15766	17487	+	GT83
MGYG000003099_02422	Transcriptional regulatory protein SrrA	TF	17511	18191	+	Trans_reg_C
MGYG000003099_02423	Adaptive-response sensory-kinase SasA	STP	18196	19980	+	HisKA\| HATPase_c
MGYG000003099_02424	Long-chain-fatty-acid--CoA ligase	TC	20107	21753	+	4.C.1.1.4
MGYG000003099_02425	Xanthine phosphoribosyltransferase	STP	21755	22321	+	Pribosyltran
MGYG000003099_02426	hypothetical protein	TC	22563	24524	+	1.B.14.15.2
MGYG000003099_02427	hypothetical protein	null	24862	25275	+	RseC_MucC
MGYG000003099_02428	Electron transport complex subunit RsxB	TC	25312	26175	+	3.D.6.1.2
MGYG000003099_02429	Electron transport complex subunit RnfC	TC	26187	27521	+	3.D.6.1.2
MGYG000003099_02430	Electron transport complex subunit RsxD	TC	27541	28488	+	3.D.6.1.2
MGYG000003099_02431	Electron transport complex subunit RsxG	null	28511	29125	+	FMN_bind
MGYG000003099_02432	Electron transport complex subunit RnfE	TC	29137	29721	+	3.D.6.1.2
MGYG000003099_02433	Electron transport complex subunit RsxA	TC	29724	30305	+	3.D.6.1.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature