dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003120_1|CGC1
Gene ID: MGYG000003120_00014
Location and strand information: 15556 - 16989 (-)
Family: 2.A.3.1.10
Protein type: TC
Protein description: Amino-acid permease RocE

Gene clsuter ID: MGYG000003120_1|CGC1
Gene ID: MGYG000003120_00015
Location and strand information: 17137 - 19377 (-)
Family: GH3
Protein type: CAZyme
Protein description: Exo-alpha-(1->6)-L-arabinopyranosidase
Protein isoelectric point: 4.3588
Protein molecular weight: 81025.78
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003120_1|CGC1
Gene ID: MGYG000003120_00016
Location and strand information: 19410 - 21530 (-)
Family: GH42
Protein type: CAZyme
Protein description: Beta-galactosidase BgaA
Protein isoelectric point: 4.68
Protein molecular weight: 78273.14
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003120_1|CGC1
Gene ID: MGYG000003120_00017
Location and strand information: 21606 - 22949 (-)
Family: GH30_2|GH30
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.4161
Protein molecular weight: 51459.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003120_1|CGC1
Gene ID: MGYG000003120_00018
Location and strand information: 23022 - 24281 (-)
Family: 2.A.1.2.93
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003120_1|CGC1
Gene ID: MGYG000003120_00019
Location and strand information: 24868 - 26553 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003120_1|CGC1
Gene ID: MGYG000003120_00020
Location and strand information: 26796 - 28325 (+)
Family: 2.A.3.1.3
Protein type: TC
Protein description: Aromatic amino acid transport protein AroP

Gene clsuter ID: MGYG000003120_1|CGC1
Gene ID: MGYG000003120_00021
Location and strand information: 28391 - 28594 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003120_1|CGC1
Gene ID: MGYG000003120_00022
Location and strand information: 28598 - 29113 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003120_1|CGC1
Gene ID: MGYG000003120_00023
Location and strand information: 29130 - 29924 (-)
Family: 3.A.1.122.8
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein YknY

Gene clsuter ID: MGYG000003120_1|CGC1
Gene ID: MGYG000003120_00024
Location and strand information: 29945 - 31171 (-)
Family: 3.A.1.122.8
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003120_1|CGC1
Gene ID: MGYG000003120_00025
Location and strand information: 31161 - 32489 (-)
Family: 3.A.1.122.8
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003120_1|CGC1
Gene ID: MGYG000003120_00026
Location and strand information: 32504 - 33787 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003120_1|CGC1
Gene ID: MGYG000003120_00027
Location and strand information: 33898 - 34533 (-)
Family: 2.A.108.2.10
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003120_1|CGC1
Gene ID: MGYG000003120_00028
Location and strand information: 34608 - 36377 (-)
Family: 2.A.108.2.11
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003120_1|CGC1
Gene ID: MGYG000003120_00029
Location and strand information: 36518 - 37402 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003120_1|CGC1
Gene ID: MGYG000003120_00030
Location and strand information: 37411 - 38889 (-)
Family: 2.A.3.1.20
Protein type: TC
Protein description: DL-alanine permease SerP2

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000003120_00015	GH3_e78\|3.2.1.37\|3.2.1.23\|3.2.1.21\|3.2.1.-	xylan\|beta-glucan
MGYG000003120_00016	GH42_e0
MGYG000003120_00017	GH30_e36\|3.2.1.37	xylan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is xylan

Substrate predicted by dbCAN-PUL is gentiobiose download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003120_00014	Amino-acid permease RocE	TC	15556	16989	-	2.A.3.1.10
MGYG000003120_00015	Exo-alpha-(1->6)-L-arabinopyranosidase	CAZyme	17137	19377	-	GH3
MGYG000003120_00016	Beta-galactosidase BgaA	CAZyme	19410	21530	-	GH42
MGYG000003120_00017	hypothetical protein	CAZyme	21606	22949	-	GH30_2\| GH30
MGYG000003120_00018	hypothetical protein	TC	23022	24281	-	2.A.1.2.93
MGYG000003120_00019	hypothetical protein	null	24868	26553	+	No domain
MGYG000003120_00020	Aromatic amino acid transport protein AroP	TC	26796	28325	+	2.A.3.1.3
MGYG000003120_00021	hypothetical protein	null	28391	28594	+	No domain
MGYG000003120_00022	hypothetical protein	null	28598	29113	-	FMN_bind
MGYG000003120_00023	putative ABC transporter ATP-binding protein YknY	TC	29130	29924	-	3.A.1.122.8
MGYG000003120_00024	hypothetical protein	TC	29945	31171	-	3.A.1.122.8
MGYG000003120_00025	hypothetical protein	TC	31161	32489	-	3.A.1.122.8
MGYG000003120_00026	hypothetical protein	null	32504	33787	-	FtrD-like
MGYG000003120_00027	hypothetical protein	TC	33898	34533	-	2.A.108.2.10
MGYG000003120_00028	hypothetical protein	TC	34608	36377	-	2.A.108.2.11
MGYG000003120_00029	hypothetical protein	null	36518	37402	+	ApbE
MGYG000003120_00030	DL-alanine permease SerP2	TC	37411	38889	-	2.A.3.1.20
Protein ID	Protein Name	Type	Start	End	Strand	Signature