dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003135_1|CGC4
Gene ID: MGYG000003135_00293
Location and strand information: 357207 - 361022 (+)
Family: CBM50
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.5887
Protein molecular weight: 132909.57
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003135_1|CGC4
Gene ID: MGYG000003135_00294
Location and strand information: 361022 - 361213 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003135_1|CGC4
Gene ID: MGYG000003135_00295
Location and strand information: 361129 - 362487 (-)
Family: 2.A.1.21.16
Protein type: TC
Protein description: putative MFS-type transporter

Gene clsuter ID: MGYG000003135_1|CGC4
Gene ID: MGYG000003135_00296
Location and strand information: 362977 - 364668 (+)
Family: null
Protein type: null
Protein description: Formate--tetrahydrofolate ligase

Gene clsuter ID: MGYG000003135_1|CGC4
Gene ID: MGYG000003135_00297
Location and strand information: 364647 - 365153 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003135_1|CGC4
Gene ID: MGYG000003135_00298
Location and strand information: 365514 - 368096 (-)
Family: 3.A.1.125.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003135_1|CGC4
Gene ID: MGYG000003135_00299
Location and strand information: 368096 - 368884 (-)
Family: 3.A.1.125.3
Protein type: TC
Protein description: Bacitracin export ATP-binding protein BceA

Gene clsuter ID: MGYG000003135_1|CGC4
Gene ID: MGYG000003135_00300
Location and strand information: 369305 - 369964 (-)
Family: GerE
Protein type: TF
Protein description: Oxygen regulatory protein NreC

Gene clsuter ID: MGYG000003135_1|CGC4
Gene ID: MGYG000003135_00301
Location and strand information: 370094 - 370924 (-)
Family: 3.A.1.1.23
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000003135_1|CGC4
Gene ID: MGYG000003135_00302
Location and strand information: 370921 - 371889 (-)
Family: 3.A.1.1.23
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000003135_1|CGC4
Gene ID: MGYG000003135_00303
Location and strand information: 371906 - 373210 (-)
Family: 3.A.1.1.23
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003135_1|CGC4
Gene ID: MGYG000003135_00304
Location and strand information: 373570 - 374322 (+)
Family: HTH_DeoR
Protein type: TF
Protein description: Glucitol operon repressor

Gene clsuter ID: MGYG000003135_1|CGC4
Gene ID: MGYG000003135_00305
Location and strand information: 374319 - 375707 (+)
Family: GH4
Protein type: CAZyme
Protein description: 6-phospho-alpha-glucosidase
Protein isoelectric point: 4.6643
Protein molecular weight: 50357.95
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003135_1|CGC4
Gene ID: MGYG000003135_00306
Location and strand information: 375700 - 378879 (+)
Family: GH38
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.5137
Protein molecular weight: 117634.79
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003135_1|CGC4
Gene ID: MGYG000003135_00307
Location and strand information: 378876 - 379931 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003135_1|CGC4
Gene ID: MGYG000003135_00308
Location and strand information: 379925 - 380656 (+)
Family: null
Protein type: null
Protein description: Phosphoglycolate phosphatase

Gene clsuter ID: MGYG000003135_1|CGC4
Gene ID: MGYG000003135_00309
Location and strand information: 380653 - 381957 (+)
Family: GH125
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.4992
Protein molecular weight: 47922.62
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003135_1|CGC4
Gene ID: MGYG000003135_00310
Location and strand information: 381941 - 383698 (-)
Family: GH20|CBM32
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.5663
Protein molecular weight: 63906.68
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000003135_00293	CBM50_e181
MGYG000003135_00305	GH4_e1
MGYG000003135_00306	GH38_e12\|3.2.1.24	hostglycan
MGYG000003135_00309	GH125_e0
MGYG000003135_00310	GH20_e55\|CBM32_e134\|3.2.1.52	hostglycan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is host glycan

Substrate predicted by dbCAN-PUL is alpha-mannan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003135_00293	hypothetical protein	CAZyme	357207	361022	+	CBM50
MGYG000003135_00294	hypothetical protein	null	361022	361213	+	No domain
MGYG000003135_00295	putative MFS-type transporter	TC	361129	362487	-	2.A.1.21.16
MGYG000003135_00296	Formate--tetrahydrofolate ligase	null	362977	364668	+	FTHFS
MGYG000003135_00297	hypothetical protein	null	364647	365153	-	No domain
MGYG000003135_00298	hypothetical protein	TC	365514	368096	-	3.A.1.125.3
MGYG000003135_00299	Bacitracin export ATP-binding protein BceA	TC	368096	368884	-	3.A.1.125.3
MGYG000003135_00300	Oxygen regulatory protein NreC	TF	369305	369964	-	GerE
MGYG000003135_00301	L-arabinose transport system permease protein AraQ	TC	370094	370924	-	3.A.1.1.23
MGYG000003135_00302	Lactose transport system permease protein LacF	TC	370921	371889	-	3.A.1.1.23
MGYG000003135_00303	hypothetical protein	TC	371906	373210	-	3.A.1.1.23
MGYG000003135_00304	Glucitol operon repressor	TF	373570	374322	+	HTH_DeoR
MGYG000003135_00305	6-phospho-alpha-glucosidase	CAZyme	374319	375707	+	GH4
MGYG000003135_00306	hypothetical protein	CAZyme	375700	378879	+	GH38
MGYG000003135_00307	hypothetical protein	null	378876	379931	+	Phosphodiest
MGYG000003135_00308	Phosphoglycolate phosphatase	null	379925	380656	+	HAD_2
MGYG000003135_00309	hypothetical protein	CAZyme	380653	381957	+	GH125
MGYG000003135_00310	hypothetical protein	CAZyme	381941	383698	-	GH20\| CBM32
Protein ID	Protein Name	Type	Start	End	Strand	Signature