dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003187_6|CGC1
Gene ID: MGYG000003187_02238
Location and strand information: 74411 - 75511 (+)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system permease protein LptF

Gene clsuter ID: MGYG000003187_6|CGC1
Gene ID: MGYG000003187_02239
Location and strand information: 75511 - 76593 (+)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system permease protein LptG

Gene clsuter ID: MGYG000003187_6|CGC1
Gene ID: MGYG000003187_02240
Location and strand information: 76728 - 79061 (+)
Family: PAS+HisKA+HATPase_c+Response_reg
Protein type: STP
Protein description: Aerobic respiration control sensor protein ArcB

Gene clsuter ID: MGYG000003187_6|CGC1
Gene ID: MGYG000003187_02241
Location and strand information: 79290 - 79943 (+)
Family: null
Protein type: null
Protein description: Glyoxalase ElbB

Gene clsuter ID: MGYG000003187_6|CGC1
Gene ID: MGYG000003187_02242
Location and strand information: 79940 - 80665 (+)
Family: GT51
Protein type: CAZyme
Protein description: Biosynthetic peptidoglycan transglycosylase
Protein isoelectric point: 10.8326
Protein molecular weight: 27172.53
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003187_6|CGC1
Gene ID: MGYG000003187_02243
Location and strand information: 80662 - 80934 (-)
Family: 8.A.8.1.5
Protein type: TC
Protein description: Phosphocarrier protein NPr

Gene clsuter ID: MGYG000003187_6|CGC1
Gene ID: MGYG000003187_02244
Location and strand information: 80931 - 81785 (-)
Family: null
Protein type: null
Protein description: RNase adapter protein RapZ

Gene clsuter ID: MGYG000003187_6|CGC1
Gene ID: MGYG000003187_02245
Location and strand information: 81831 - 82322 (-)
Family: 4.A.2.1.4
Protein type: TC
Protein description: Nitrogen regulatory protein

Gene clsuter ID: MGYG000003187_6|CGC1
Gene ID: MGYG000003187_02246
Location and strand information: 82405 - 82692 (-)
Family: null
Protein type: null
Protein description: Ribosome hibernation promoting factor

Gene clsuter ID: MGYG000003187_6|CGC1
Gene ID: MGYG000003187_02247
Location and strand information: 82715 - 84148 (-)
Family: null
Protein type: null
Protein description: RNA polymerase sigma-54 factor

Gene clsuter ID: MGYG000003187_6|CGC1
Gene ID: MGYG000003187_02248
Location and strand information: 84196 - 84921 (-)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system ATP-binding protein LptB

Gene clsuter ID: MGYG000003187_6|CGC1
Gene ID: MGYG000003187_02249
Location and strand information: 84928 - 85482 (-)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system protein LptA

Gene clsuter ID: MGYG000003187_6|CGC1
Gene ID: MGYG000003187_02250
Location and strand information: 85451 - 86026 (-)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system protein LptC

Gene clsuter ID: MGYG000003187_6|CGC1
Gene ID: MGYG000003187_02251
Location and strand information: 86023 - 86589 (-)
Family: null
Protein type: null
Protein description: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC

Gene clsuter ID: MGYG000003187_6|CGC1
Gene ID: MGYG000003187_02252
Location and strand information: 86604 - 87590 (-)
Family: SIS+CBS+CBS
Protein type: STP
Protein description: Arabinose 5-phosphate isomerase KdsD

Gene clsuter ID: MGYG000003187_6|CGC1
Gene ID: MGYG000003187_02253
Location and strand information: 87604 - 88581 (-)
Family: 2.A.19.5.1
Protein type: TC
Protein description: Inner membrane protein YrbG

Gene clsuter ID: MGYG000003187_6|CGC1
Gene ID: MGYG000003187_02254
Location and strand information: 88811 - 89623 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid import ATP-binding protein MlaF

Gene clsuter ID: MGYG000003187_6|CGC1
Gene ID: MGYG000003187_02255
Location and strand information: 89631 - 90413 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid ABC transporter permease protein MlaE

Gene clsuter ID: MGYG000003187_6|CGC1
Gene ID: MGYG000003187_02256
Location and strand information: 90418 - 90978 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid ABC transporter-binding protein MlaD

Gene clsuter ID: MGYG000003187_6|CGC1
Gene ID: MGYG000003187_02257
Location and strand information: 90982 - 91617 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid-binding protein MlaC

Gene clsuter ID: MGYG000003187_6|CGC1
Gene ID: MGYG000003187_02258
Location and strand information: 91617 - 91910 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid ABC transporter-binding protein MlaB

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CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003187_02238	Lipopolysaccharide export system permease protein LptF	TC	74411	75511	+	1.B.42.1.2
MGYG000003187_02239	Lipopolysaccharide export system permease protein LptG	TC	75511	76593	+	1.B.42.1.2
MGYG000003187_02240	Aerobic respiration control sensor protein ArcB	STP	76728	79061	+	PAS\| HisKA\| HATPase_c\| Response_reg
MGYG000003187_02241	Glyoxalase ElbB	null	79290	79943	+	No domain
MGYG000003187_02242	Biosynthetic peptidoglycan transglycosylase	CAZyme	79940	80665	+	GT51
MGYG000003187_02243	Phosphocarrier protein NPr	TC	80662	80934	-	8.A.8.1.5
MGYG000003187_02244	RNase adapter protein RapZ	null	80931	81785	-	ATP_bind_2
MGYG000003187_02245	Nitrogen regulatory protein	TC	81831	82322	-	4.A.2.1.4
MGYG000003187_02246	Ribosome hibernation promoting factor	null	82405	82692	-	Ribosomal_S30AE
MGYG000003187_02247	RNA polymerase sigma-54 factor	null	82715	84148	-	Sigma54_AID\| Sigma54_CBD\| Sigma54_DBD
MGYG000003187_02248	Lipopolysaccharide export system ATP-binding protein LptB	TC	84196	84921	-	1.B.42.1.2
MGYG000003187_02249	Lipopolysaccharide export system protein LptA	TC	84928	85482	-	1.B.42.1.2
MGYG000003187_02250	Lipopolysaccharide export system protein LptC	TC	85451	86026	-	1.B.42.1.2
MGYG000003187_02251	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC	null	86023	86589	-	Hydrolase_3
MGYG000003187_02252	Arabinose 5-phosphate isomerase KdsD	STP	86604	87590	-	SIS\| CBS\| CBS
MGYG000003187_02253	Inner membrane protein YrbG	TC	87604	88581	-	2.A.19.5.1
MGYG000003187_02254	putative phospholipid import ATP-binding protein MlaF	TC	88811	89623	+	3.A.1.27.3
MGYG000003187_02255	putative phospholipid ABC transporter permease protein MlaE	TC	89631	90413	+	3.A.1.27.3
MGYG000003187_02256	putative phospholipid ABC transporter-binding protein MlaD	TC	90418	90978	+	3.A.1.27.3
MGYG000003187_02257	putative phospholipid-binding protein MlaC	TC	90982	91617	+	3.A.1.27.3
MGYG000003187_02258	putative phospholipid ABC transporter-binding protein MlaB	TC	91617	91910	+	3.A.1.27.3
Protein ID	Protein Name	Type	Start	End	Strand	Signature