dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003236_104|CGC1
Gene ID: MGYG000003236_02472
Location and strand information: 29663 - 32095 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 5.2708
Protein molecular weight: 90399.19
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003236_104|CGC1
Gene ID: MGYG000003236_02473
Location and strand information: 32144 - 33046 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000003236_104|CGC1
Gene ID: MGYG000003236_02474
Location and strand information: 33221 - 35128 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003236_104|CGC1
Gene ID: MGYG000003236_02475
Location and strand information: 35240 - 37210 (+)
Family: GH20
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8722
Protein molecular weight: 75464.23
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003236_104|CGC1
Gene ID: MGYG000003236_02476
Location and strand information: 37250 - 38401 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003236_104|CGC1
Gene ID: MGYG000003236_02477
Location and strand information: 38646 - 40052 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000003236_104|CGC1
Gene ID: MGYG000003236_02478
Location and strand information: 40053 - 41927 (-)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003236_104|CGC1
Gene ID: MGYG000003236_02479
Location and strand information: 42341 - 43288 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000003236_104|CGC1
Gene ID: MGYG000003236_02480
Location and strand information: 43320 - 44228 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003236_02472	Beta-galactosidase	CAZyme	29663	32095	-	GH2
MGYG000003236_02473	HTH-type transcriptional activator RhaR	TF	32144	33046	-	HTH_AraC+HTH_AraC
MGYG000003236_02474	hypothetical protein	null	33221	35128	+	DUF4964\| DUF5127\| DUF5127\| DUF4965\| DUF1793
MGYG000003236_02475	hypothetical protein	CAZyme	35240	37210	+	GH20
MGYG000003236_02476	hypothetical protein	null	37250	38401	+	No domain
MGYG000003236_02477	HTH-type transcriptional activator RhaR	TF	38646	40052	-	HTH_AraC+HTH_AraC
MGYG000003236_02478	hypothetical protein	TC	40053	41927	-	8.A.59.2.1
MGYG000003236_02479	putative multiple-sugar transport system permease YteP	TC	42341	43288	+	3.A.1.1.10
MGYG000003236_02480	L-arabinose transport system permease protein AraQ	TC	43320	44228	+	3.A.1.1.10
Protein ID	Protein Name	Type	Start	End	Strand	Signature